RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 NTSR2O95665 410 aa31.98■■■□□ 2.71
TNFRSF4-201ENST00000379236 PRELPP51888 382 aa31.98■■■□□ 2.71
TNFRSF4-201ENST00000379236 UTP14AQ9BVJ6 771 aaKnown RBP31.98■■■□□ 2.71
TNFRSF4-201ENST00000379236 ZNF853P0CG23 659 aa31.97■■■□□ 2.71
TNFRSF4-201ENST00000379236 RRAGCQ9HB90 399 aa31.97■■■□□ 2.71
TNFRSF4-201ENST00000379236 CRY2Q49AN0 593 aa31.95■■■□□ 2.71
TNFRSF4-201ENST00000379236 DPY19L2Q6NUT2 758 aa31.95■■■□□ 2.71
TNFRSF4-201ENST00000379236 HYPKQ9NX55 129 aa31.95■■■□□ 2.71
TNFRSF4-201ENST00000379236 GLTPD2A6NH11 291 aa31.94■■■□□ 2.7
TNFRSF4-201ENST00000379236 RNF123Q5XPI4 1314 aa31.94■■■□□ 2.7
TNFRSF4-201ENST00000379236 RTKN2Q8IZC4 609 aa31.93■■■□□ 2.7
TNFRSF4-201ENST00000379236 RBM17Q96I25 401 aaKnown RBP31.93■■■□□ 2.7
TNFRSF4-201ENST00000379236 NLRP3Q96P20 1036 aa31.93■■■□□ 2.7
TNFRSF4-201ENST00000379236 LAMB2P55268 1798 aa31.93■■■□□ 2.7
TNFRSF4-201ENST00000379236 HSPA6P17066 643 aa31.92■■■□□ 2.7
TNFRSF4-201ENST00000379236 TCIRG1Q13488 830 aa31.92■■■□□ 2.7
TNFRSF4-201ENST00000379236 C7orf43Q8WVR3 580 aa31.92■■■□□ 2.7
TNFRSF4-201ENST00000379236 ELL2O00472 640 aaPredicted RBP31.91■■■□□ 2.7
TNFRSF4-201ENST00000379236 PLBD2Q8NHP8 589 aa31.91■■■□□ 2.7
TNFRSF4-201ENST00000379236 CHMP4AQ9BY43 222 aa31.91■■■□□ 2.7
TNFRSF4-201ENST00000379236 FKBP4Q02790 459 aaKnown RBP eCLIP31.9■■■□□ 2.7
TNFRSF4-201ENST00000379236 ANKRD13DQ6ZTN6 518 aa31.9■■■□□ 2.7
TNFRSF4-201ENST00000379236 NLRP10Q86W26 655 aa31.9■■■□□ 2.7
TNFRSF4-201ENST00000379236 RBM46Q8TBY0 533 aaKnown RBP31.89■■■□□ 2.7
TNFRSF4-201ENST00000379236 TRMT112Q9UI30 125 aaKnown RBP31.89■■■□□ 2.7
TNFRSF4-201ENST00000379236 WDR90Q96KV7 1748 aa31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 HOXA10P31260 410 aaPredicted RBP31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 GOLGA2Q08379 1002 aa31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 CCDC27Q2M243 656 aa31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 OLFM4Q6UX06 510 aa31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 TMX4Q9H1E5 349 aaPredicted RBP31.87■■■□□ 2.69
TNFRSF4-201ENST00000379236 VEGFAP15692 232 aaPredicted RBP31.86■■■□□ 2.69
TNFRSF4-201ENST00000379236 CC2D2BQ6DHV5 1058 aa31.86■■■□□ 2.69
TNFRSF4-201ENST00000379236 CRAMP1Q96RY5 1269 aa31.86■■■□□ 2.69
TNFRSF4-201ENST00000379236 SH3TC1Q8TE82 1336 aa31.85■■■□□ 2.69
TNFRSF4-201ENST00000379236 SLC10A5Q5PT55 438 aa31.85■■■□□ 2.69
TNFRSF4-201ENST00000379236 ZNF277Q9NRM2 450 aaPredicted RBP31.85■■■□□ 2.69
TNFRSF4-201ENST00000379236 PPEF1O14829 653 aaPredicted RBP31.84■■■□□ 2.69
TNFRSF4-201ENST00000379236 RIC3Q7Z5B4 369 aa31.84■■■□□ 2.69
TNFRSF4-201ENST00000379236 C8orf58Q8NAV2 365 aa31.84■■■□□ 2.69
TNFRSF4-201ENST00000379236 CCDC30Q5VVM6 783 aa31.83■■■□□ 2.69
TNFRSF4-201ENST00000379236 WWC1Q8IX03 1113 aa31.83■■■□□ 2.69
TNFRSF4-201ENST00000379236 DDX60Q8IY21 1712 aaKnown RBP31.83■■■□□ 2.69
TNFRSF4-201ENST00000379236 TCERG1O14776 1098 aaKnown RBP31.82■■■□□ 2.68
TNFRSF4-201ENST00000379236 GRIPAP1Q4V328 841 aa31.82■■■□□ 2.68
TNFRSF4-201ENST00000379236 C3orf67Q6ZVT6 689 aa31.82■■■□□ 2.68
TNFRSF4-201ENST00000379236 SYNE4Q8N205 404 aa31.82■■■□□ 2.68
TNFRSF4-201ENST00000379236 TSR2Q969E8 191 aaKnown RBP31.82■■■□□ 2.68
TNFRSF4-201ENST00000379236 HCLS1P14317 486 aaPredicted RBP31.81■■■□□ 2.68
TNFRSF4-201ENST00000379236 FSTL1Q12841 308 aa31.81■■■□□ 2.68
TNFRSF4-201ENST00000379236 ATP5J2-PTCD1G3V325 749 aa31.8■■■□□ 2.68
TNFRSF4-201ENST00000379236 IARSP41252 1262 aaKnown RBP31.8■■■□□ 2.68
TNFRSF4-201ENST00000379236 ZNF428Q96B54 188 aa31.8■■■□□ 2.68
TNFRSF4-201ENST00000379236 APLP1P51693 650 aa31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 SMC1BQ8NDV3 1235 aa31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 PSMD1Q99460 953 aa31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 PHAXQ9H814 394 aaKnown RBP31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 SALL2Q9Y467 1007 aaPredicted RBP31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 CEP350Q5VT06 3117 aa31.79■■■□□ 2.68
TNFRSF4-201ENST00000379236 DDX58O95786 925 aaKnown RBP31.78■■■□□ 2.68
TNFRSF4-201ENST00000379236 NCBP3Q53F19 620 aaKnown RBP31.78■■■□□ 2.68
TNFRSF4-201ENST00000379236 DDX46Q7L014 1031 aaKnown RBP31.78■■■□□ 2.68
TNFRSF4-201ENST00000379236 ISCA1Q9BUE6 129 aa31.78■■■□□ 2.68
TNFRSF4-201ENST00000379236 ABCC4O15439 1325 aa31.77■■■□□ 2.68
TNFRSF4-201ENST00000379236 IL16Q14005 1332 aa31.77■■■□□ 2.68
TNFRSF4-201ENST00000379236 FAM9BQ8IZU0 186 aa31.77■■■□□ 2.68
TNFRSF4-201ENST00000379236 STK31Q9BXU1 1019 aa31.77■■■□□ 2.68
TNFRSF4-201ENST00000379236 SCN4AP35499 1836 aa31.77■■■□□ 2.68
TNFRSF4-201ENST00000379236 TAF1P21675 1872 aa31.76■■■□□ 2.68
TNFRSF4-201ENST00000379236 DDNO94850 711 aaPredicted RBP31.76■■■□□ 2.67
TNFRSF4-201ENST00000379236 JDP2Q8WYK2 163 aa31.76■■■□□ 2.67
TNFRSF4-201ENST00000379236 TSPYL6Q8N831 410 aa31.75■■■□□ 2.67
TNFRSF4-201ENST00000379236 FAM89AQ96GI7 184 aa31.74■■■□□ 2.67
TNFRSF4-201ENST00000379236 SNED1Q8TER0 1413 aa31.74■■■□□ 2.67
TNFRSF4-201ENST00000379236 TWISTNBQ3B726 338 aaPredicted RBP31.73■■■□□ 2.67
TNFRSF4-201ENST00000379236 MYD88Q99836 296 aa31.73■■■□□ 2.67
TNFRSF4-201ENST00000379236 CACNA1FO60840 1977 aa31.73■■■□□ 2.67
TNFRSF4-201ENST00000379236 BBOX1O75936 387 aa31.72■■■□□ 2.67
TNFRSF4-201ENST00000379236 RTL5Q5HYW3 569 aaPredicted RBP31.72■■■□□ 2.67
TNFRSF4-201ENST00000379236 ATP6V0A2Q9Y487 856 aa31.72■■■□□ 2.67
TNFRSF4-201ENST00000379236 IQCA1LA6NCM1 817 aa31.71■■■□□ 2.67
TNFRSF4-201ENST00000379236 TRIM28Q13263 835 aaKnown RBP31.71■■■□□ 2.67
TNFRSF4-201ENST00000379236 HSP90B1P14625 803 aaKnown RBP31.7■■■□□ 2.67
TNFRSF4-201ENST00000379236 GRAPQ13588 217 aa31.7■■■□□ 2.67
TNFRSF4-201ENST00000379236 LARGE2Q8N3Y3 721 aa31.7■■■□□ 2.67
TNFRSF4-201ENST00000379236 GRAPLQ8TC17 118 aaPredicted RBP31.7■■■□□ 2.67
TNFRSF4-201ENST00000379236 ZNF541Q9H0D2 1346 aa31.7■■■□□ 2.66
TNFRSF4-201ENST00000379236 POTECB2RU33 542 aa31.69■■■□□ 2.66
TNFRSF4-201ENST00000379236 WDR63Q8IWG1 891 aa31.69■■■□□ 2.66
TNFRSF4-201ENST00000379236 SUPT20HQ8NEM7 779 aa31.69■■■□□ 2.66
TNFRSF4-201ENST00000379236 IRS4O14654 1257 aaPredicted RBP31.68■■■□□ 2.66
TNFRSF4-201ENST00000379236 EIF6P56537 245 aaKnown RBP31.68■■■□□ 2.66
TNFRSF4-201ENST00000379236 DPP8Q6V1X1 898 aaPredicted RBP31.67■■■□□ 2.66
TNFRSF4-201ENST00000379236 SP8Q8IXZ3 490 aa31.67■■■□□ 2.66
TNFRSF4-201ENST00000379236 FANCIQ9NVI1 1328 aa31.67■■■□□ 2.66
TNFRSF4-201ENST00000379236 FZD9O00144 591 aa31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 TMC4Q7Z404 712 aa31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 NIM1KQ8IY84 436 aa31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 ZBTB38Q8NAP3 1195 aaPredicted RBP31.66■■■□□ 2.66
TNFRSF4-201ENST00000379236 CCDC191Q8NCU4 936 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms