RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 MTX1Q13505 466 aa28.86■■■□□ 2.21
PPM1B-203ENST00000378540 ILDR1Q86SU0 546 aaPredicted RBP28.85■■■□□ 2.21
PPM1B-203ENST00000378540 ZNF34Q8IZ26 560 aa28.85■■■□□ 2.21
PPM1B-203ENST00000378540 ZBTB47Q9UFB7 747 aaPredicted RBP28.85■■■□□ 2.21
PPM1B-203ENST00000378540 PROM2Q8N271 834 aa28.84■■■□□ 2.21
PPM1B-203ENST00000378540 ANKRD36CQ5JPF3 1778 aa28.84■■■□□ 2.21
PPM1B-203ENST00000378540 PLSCR1O15162 318 aa28.83■■■□□ 2.21
PPM1B-203ENST00000378540 PHF14O94880 888 aa28.83■■■□□ 2.21
PPM1B-203ENST00000378540 AMIGO3Q86WK7 504 aa28.83■■■□□ 2.21
PPM1B-203ENST00000378540 FAM89AQ96GI7 184 aa28.83■■■□□ 2.21
PPM1B-203ENST00000378540 ZNF652Q9Y2D9 606 aa28.83■■■□□ 2.21
PPM1B-203ENST00000378540 PCCAP05165 728 aaPredicted RBP28.83■■■□□ 2.21
PPM1B-203ENST00000378540 SURF6O75683 361 aaKnown RBP28.82■■■□□ 2.2
PPM1B-203ENST00000378540 PDE4AP27815 886 aa28.82■■■□□ 2.2
PPM1B-203ENST00000378540 ZBTB38Q8NAP3 1195 aaPredicted RBP28.82■■■□□ 2.2
PPM1B-203ENST00000378540 UBN2Q6ZU65 1347 aa28.81■■■□□ 2.2
PPM1B-203ENST00000378540 TRAPPC3LQ5T215 181 aa28.81■■■□□ 2.2
PPM1B-203ENST00000378540 ARHGEF1Q92888 912 aaKnown RBP28.81■■■□□ 2.2
PPM1B-203ENST00000378540 TRMT112Q9UI30 125 aaKnown RBP28.81■■■□□ 2.2
PPM1B-203ENST00000378540 SMARCA5O60264 1052 aaPredicted RBP28.8■■■□□ 2.2
PPM1B-203ENST00000378540 ZPR1O75312 459 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 SRP68Q9UHB9 627 aaKnown RBP28.8■■■□□ 2.2
PPM1B-203ENST00000378540 NARFQ9UHQ1 456 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 NIP7Q9Y221 180 aaKnown RBP eCLIP28.8■■■□□ 2.2
PPM1B-203ENST00000378540 FAM177BA6PVY3 158 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 FOXO4P98177 505 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 USPL1Q5W0Q7 1092 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 CLEC4GQ6UXB4 293 aa28.8■■■□□ 2.2
PPM1B-203ENST00000378540 SYNE4Q8N205 404 aa28.79■■■□□ 2.2
PPM1B-203ENST00000378540 CHMP3Q9Y3E7 222 aa28.79■■■□□ 2.2
PPM1B-203ENST00000378540 SUSD4Q5VX71 490 aa28.78■■■□□ 2.2
PPM1B-203ENST00000378540 LMBR1LQ6UX01 489 aa28.78■■■□□ 2.2
PPM1B-203ENST00000378540 BCORQ6W2J9 1755 aa28.78■■■□□ 2.2
PPM1B-203ENST00000378540 RFC4P35249 363 aa28.77■■■□□ 2.2
PPM1B-203ENST00000378540 RABL6Q3YEC7 729 aaPredicted RBP28.77■■■□□ 2.2
PPM1B-203ENST00000378540 PA2G4Q9UQ80 394 aaKnown RBP28.77■■■□□ 2.2
PPM1B-203ENST00000378540 PARP10Q53GL7 1025 aa28.77■■■□□ 2.2
PPM1B-203ENST00000378540 HMGB2P26583 209 aaKnown RBP28.76■■■□□ 2.19
PPM1B-203ENST00000378540 TNS1Q9HBL0 1735 aaKnown RBP28.76■■■□□ 2.19
PPM1B-203ENST00000378540 OS9Q13438 667 aaPredicted RBP28.75■■■□□ 2.19
PPM1B-203ENST00000378540 BICDL1Q6ZP65 573 aa28.75■■■□□ 2.19
PPM1B-203ENST00000378540 UTP14AQ9BVJ6 771 aaKnown RBP28.75■■■□□ 2.19
PPM1B-203ENST00000378540 LRRCC1Q9C099 1032 aa28.75■■■□□ 2.19
PPM1B-203ENST00000378540 BCL2L12Q9HB09 334 aa28.75■■■□□ 2.19
PPM1B-203ENST00000378540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.74■■■□□ 2.19
PPM1B-203ENST00000378540 RAB11FIP3O75154 756 aa28.74■■■□□ 2.19
PPM1B-203ENST00000378540 CDHR2Q9BYE9 1310 aa28.74■■■□□ 2.19
PPM1B-203ENST00000378540 HSP90AB4PQ58FF6 505 aa28.74■■■□□ 2.19
PPM1B-203ENST00000378540 C16orf71Q8IYS4 520 aaPredicted RBP28.74■■■□□ 2.19
PPM1B-203ENST00000378540 NOP58Q9Y2X3 529 aaKnown RBP28.74■■■□□ 2.19
PPM1B-203ENST00000378540 IRS4O14654 1257 aaPredicted RBP28.73■■■□□ 2.19
PPM1B-203ENST00000378540 KLHDC4Q8TBB5 520 aa28.73■■■□□ 2.19
PPM1B-203ENST00000378540 ADRA2BP18089 450 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 TBC1D9BQ66K14 1250 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 SCN7AQ01118 1682 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 RGL2O15211 777 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 PLA2G12BQ9BX93 195 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 SIL1Q9H173 461 aa28.72■■■□□ 2.19
PPM1B-203ENST00000378540 G3BP1Q13283 466 aaKnown RBP eCLIP28.71■■■□□ 2.19
PPM1B-203ENST00000378540 USP42Q9H9J4 1324 aaKnown RBP28.71■■■□□ 2.19
PPM1B-203ENST00000378540 UBR3Q6ZT12 1888 aa28.7■■■□□ 2.19
PPM1B-203ENST00000378540 RFX5P48382 616 aaPredicted RBP28.7■■■□□ 2.19
PPM1B-203ENST00000378540 CCDC85AQ96PX6 553 aaPredicted RBP28.7■■■□□ 2.19
PPM1B-203ENST00000378540 SH3TC1Q8TE82 1336 aa28.7■■■□□ 2.18
PPM1B-203ENST00000378540 SSFA2P28290 1259 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 RHPN1Q8TCX5 695 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 C4AP0C0L4 1744 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 NTSR2O95665 410 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 KIF1BPQ96EK5 621 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 SETDB2Q96T68 719 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 IL1RAPL2Q9NP60 686 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
PPM1B-203ENST00000378540 EN1Q05925 392 aaPredicted RBP28.68■■■□□ 2.18
PPM1B-203ENST00000378540 ZNF827Q17R98 1081 aa28.68■■■□□ 2.18
PPM1B-203ENST00000378540 NUTM1Q86Y26 1132 aa28.68■■■□□ 2.18
PPM1B-203ENST00000378540 OTUD7AQ8TE49 926 aaPredicted RBP28.68■■■□□ 2.18
PPM1B-203ENST00000378540 PDE8AO60658 829 aa28.67■■■□□ 2.18
PPM1B-203ENST00000378540 HCLS1P14317 486 aaPredicted RBP28.67■■■□□ 2.18
PPM1B-203ENST00000378540 PTPN12Q05209 780 aaKnown RBP28.67■■■□□ 2.18
PPM1B-203ENST00000378540 COPRSQ9NQ92 184 aa28.67■■■□□ 2.18
PPM1B-203ENST00000378540 SF3B2Q13435 895 aaKnown RBP28.66■■■□□ 2.18
PPM1B-203ENST00000378540 EZH2Q15910 746 aaKnown RBP28.66■■■□□ 2.18
PPM1B-203ENST00000378540 ERC1Q8IUD2 1116 aa28.66■■■□□ 2.18
PPM1B-203ENST00000378540 CSF1RP07333 972 aa28.66■■■□□ 2.18
PPM1B-203ENST00000378540 CTSWP56202 376 aa28.66■■■□□ 2.18
PPM1B-203ENST00000378540 PLEKHM2Q8IWE5 1019 aa28.66■■■□□ 2.18
PPM1B-203ENST00000378540 AKT1S1Q96B36 256 aa28.66■■■□□ 2.18
PPM1B-203ENST00000378540 CCDC57Q2TAC2 916 aa28.64■■■□□ 2.18
PPM1B-203ENST00000378540 FAM161AQ3B820 660 aa28.64■■■□□ 2.18
PPM1B-203ENST00000378540 TTLL11Q8NHH1 800 aa28.64■■■□□ 2.18
PPM1B-203ENST00000378540 CAMKK2Q96RR4 588 aa28.64■■■□□ 2.18
PPM1B-203ENST00000378540 ZNF594Q96JF6 807 aaPredicted RBP28.63■■■□□ 2.17
PPM1B-203ENST00000378540 TSHZ2Q9NRE2 1034 aa28.63■■■□□ 2.17
PPM1B-203ENST00000378540 GTF2E1P29083 439 aaPredicted RBP28.63■■■□□ 2.17
PPM1B-203ENST00000378540 RGPD3A6NKT7 1758 aaPredicted RBP28.62■■■□□ 2.17
PPM1B-203ENST00000378540 RGPD4Q7Z3J3 1758 aa28.62■■■□□ 2.17
PPM1B-203ENST00000378540 MSH5O43196 834 aa28.62■■■□□ 2.17
PPM1B-203ENST00000378540 ERFEQ4G0M1 354 aa28.62■■■□□ 2.17
PPM1B-203ENST00000378540 NBPF5PQ86XG9 351 aaPredicted RBP28.62■■■□□ 2.17
PPM1B-203ENST00000378540 SASH1O94885 1247 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms