RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 CCDC191Q8NCU4 936 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 A0A1W2PQD8 194 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 OPA1O60313 960 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 ORC2Q13416 577 aaPredicted RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 PLCG2P16885 1265 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 KSR2Q6VAB6 950 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 INCENPQ9NQS7 918 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 NF2P35240 595 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 TMTC1Q8IUR5 882 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 ERCC5P28715 1186 aaPredicted RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 IQGAP2Q13576 1575 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 TRAPPC10P48553 1259 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 GPR161Q8N6U8 529 aaKnown RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 CUEDC2Q9H467 287 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 PSDA5PKW4 1024 aaPredicted RBP5.7□□□□□ -1.5
PCDH9-201ENST00000377861 PIK3R4Q99570 1358 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 CCDC77Q9BR77 488 aa5.7□□□□□ -1.5
PCDH9-201ENST00000377861 TTC14Q96N46 770 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 MAP4K4O95819 1239 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 SERPINC1P01008 464 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 FERMT2Q96AC1 680 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ZNF771Q7L3S4 317 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 MCMDC2Q4G0Z9 681 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 C10orf76Q5T2E6 689 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 FAM160A1Q05DH4 1040 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 CFAP58Q5T655 872 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 BLMP54132 1417 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 STX10O60499 249 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ATF3P18847 181 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ANTXR1Q9H6X2 564 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ADALQ6DHV7 355 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 GNA14O95837 355 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 IDI1Q13907 227 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 EDEM3Q9BZQ6 932 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 AKAP4Q5JQC9 854 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 CCAR1Q8IX12 1150 aaKnown RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 FAM81BQ96LP2 452 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ANKRD18BA2A2Z9 1011 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 PPM1EQ8WY54 764 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ERO1AQ96HE7 468 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 PPP1R1BQ9UD71 204 aaPredicted RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 DESP17661 470 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 ESYT1Q9BSJ8 1104 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 TCP11L1Q9NUJ3 509 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 KIF4BQ2VIQ3 1234 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 TTF2Q9UNY4 1162 aaKnown RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 RUFY3Q7L099 469 aa5.69□□□□□ -1.5
PCDH9-201ENST00000377861 CDC5LQ99459 802 aaKnown RBP5.69□□□□□ -1.5
PCDH9-201ENST00000377861 TXNDC2Q86VQ3 553 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MRGBPQ9NV56 204 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MTX1Q13505 466 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 HDXQ7Z353 690 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MOV10L1Q9BXT6 1211 aaKnown RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 POLKQ9UBT6 870 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ZNF853P0CG23 659 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 NUTM2GQ5VZR2 741 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ANXA13P27216 316 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 KRT86O43790 486 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 NEK1Q96PY6 1258 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 FLIIQ13045 1269 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 SEPT2Q15019 361 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MRPL50Q8N5N7 158 aaKnown RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 CRACR2AQ9BSW2 395 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 TUBB6Q9BUF5 446 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 TMEM57Q8N5G2 664 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ZNF652Q9Y2D9 606 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 STK38Q15208 465 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MMP14P50281 582 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 BZW2Q9Y6E2 419 aaKnown RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 UHRF1BP1LA0JNW5 1464 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 WDR78Q5VTH9 848 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 SULT6B1Q6IMI4 303 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 IQUBQ8NA54 791 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ZNF830Q96NB3 372 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 BPIFA3Q9BQP9 254 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ZC3H15Q8WU90 426 aaKnown RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 SSH3Q8TE77 659 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 CCDC175P0C221 793 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 CADPS2Q86UW7 1296 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 PAK3O75914 559 aaPredicted RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 HSPA4P34932 840 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 TPRNQ4KMQ1 711 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 MYRIPQ8NFW9 859 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 BICDL2A1A5D9 508 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 TRIM21P19474 475 aaKnown RBP5.68□□□□□ -1.5
PCDH9-201ENST00000377861 VSIG10Q8N0Z9 540 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 POTEJP0CG39 1038 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 BICDL1Q6ZP65 573 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 SHTN1A0MZ66 631 aa5.68□□□□□ -1.5
PCDH9-201ENST00000377861 ANKS4BQ8N8V4 417 aa5.67□□□□□ -1.5
PCDH9-201ENST00000377861 DSCC1Q9BVC3 393 aa5.67□□□□□ -1.5
PCDH9-201ENST00000377861 SDSP20132 328 aa5.67□□□□□ -1.5
PCDH9-201ENST00000377861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.67□□□□□ -1.5
PCDH9-201ENST00000377861 PNPLA6Q8IY17 1366 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms