RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
ABCF1-202ENST00000376545 SMC3Q9UQE7 1217 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 MED23Q9ULK4 1368 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 PKD1L3Q7Z443 1732 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
ABCF1-202ENST00000376545 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
ABCF1-202ENST00000376545 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
ABCF1-202ENST00000376545 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
ABCF1-202ENST00000376545 AACSQ86V21 672 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 FUCA2Q9BTY2 467 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 GLI3P10071 1580 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 CPA1P15085 419 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 TSGA10IPQ3SY00 556 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 LRP10Q7Z4F1 713 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
ABCF1-202ENST00000376545 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 ERBB3P21860 1342 aa12.8□□□□□ -0.36
ABCF1-202ENST00000376545 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
ABCF1-202ENST00000376545 JAKMIP1Q96N16 626 aaKnown RBP12.79□□□□□ -0.36
ABCF1-202ENST00000376545 GJB2P29033 226 aa12.79□□□□□ -0.36
ABCF1-202ENST00000376545 ME3Q16798 604 aa12.79□□□□□ -0.36
ABCF1-202ENST00000376545 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
ABCF1-202ENST00000376545 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
ABCF1-202ENST00000376545 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
ABCF1-202ENST00000376545 NEURL1BA8MQ27 555 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
ABCF1-202ENST00000376545 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
ABCF1-202ENST00000376545 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 FAM227BQ96M60 508 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
ABCF1-202ENST00000376545 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 PARP4Q9UKK3 1724 aaKnown RBP12.78□□□□□ -0.36
ABCF1-202ENST00000376545 SLC27A2O14975 620 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■□□ 16.3
ABCF1-202ENST00000376545 CCDC83Q8IWF9 413 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
ABCF1-202ENST00000376545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.362e-6■■■■■ 31.6
ABCF1-202ENST00000376545 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.36
ABCF1-202ENST00000376545 RFX7Q2KHR2 1363 aa12.77□□□□□ -0.36
ABCF1-202ENST00000376545 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 GCKRQ14397 625 aa12.77□□□□□ -0.37
ABCF1-202ENST00000376545 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.37
ABCF1-202ENST00000376545 FOXD4L6Q3SYB3 417 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
ABCF1-202ENST00000376545 FOXD4L3Q6VB84 417 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 METTL22Q9BUU2 404 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
ABCF1-202ENST00000376545 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
ABCF1-202ENST00000376545 NPHP3Q7Z494 1330 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 PSMA5P28066 241 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
ABCF1-202ENST00000376545 ELP1O95163 1332 aa12.76□□□□□ -0.37
ABCF1-202ENST00000376545 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-202ENST00000376545 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 MEGF6O75095 1541 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 PHKG2P15735 406 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-202ENST00000376545 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
ABCF1-202ENST00000376545 COL9A3Q14050 684 aaPredicted RBP12.75□□□□□ -0.37
ABCF1-202ENST00000376545 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
ABCF1-202ENST00000376545 ATP5JP18859 108 aa12.74□□□□□ -0.37
ABCF1-202ENST00000376545 RPS6KB1P23443 525 aa12.74□□□□□ -0.37
ABCF1-202ENST00000376545 TOB2Q14106 344 aaPredicted RBP12.74□□□□□ -0.37
ABCF1-202ENST00000376545 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
ABCF1-202ENST00000376545 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
ABCF1-202ENST00000376545 HSP90AA2PQ14568 343 aaPredicted RBP12.74□□□□□ -0.37
ABCF1-202ENST00000376545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
ABCF1-202ENST00000376545 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
ABCF1-202ENST00000376545 TAF5LO75529 589 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
ABCF1-202ENST00000376545 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 UBR2Q8IWV8 1755 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 MYH15Q9Y2K3 1946 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
ABCF1-202ENST00000376545 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 BOLA2Q9H3K6 86 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 FIBPO43427 364 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 KDM4AO75164 1064 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 CASP7P55210 303 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
ABCF1-202ENST00000376545 ZNF589Q86UQ0 364 aaPredicted RBP12.73□□□□□ -0.37
ABCF1-202ENST00000376545 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 FSD1Q9BTV5 496 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 TJP1Q07157 1748 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 HCLS1P14317 486 aaPredicted RBP12.72□□□□□ -0.37
ABCF1-202ENST00000376545 PDCP20941 246 aa12.72□□□□□ -0.37
ABCF1-202ENST00000376545 BLOC1S2Q6QNY1 142 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms