RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
MSH5-201ENST00000375703 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 TCHHQ07283 1943 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 DNM1Q05193 864 aaKnown RBP17.4■□□□□ 0.38
MSH5-201ENST00000375703 SIL1Q9H173 461 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 PDIA6Q15084 440 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 NECAB1Q8N987 351 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 BOLA2Q9H3K6 86 aa17.4■□□□□ 0.38
MSH5-201ENST00000375703 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.37
MSH5-201ENST00000375703 PSMA5P28066 241 aa17.39■□□□□ 0.37
MSH5-201ENST00000375703 VPS37CA5D8V6 355 aaPredicted RBP17.39■□□□□ 0.37
MSH5-201ENST00000375703 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
MSH5-201ENST00000375703 SLC27A2O14975 620 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 IGKV5-2P06315 115 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
MSH5-201ENST00000375703 TLR7Q9NYK1 1049 aaKnown RBP17.38■□□□□ 0.37
MSH5-201ENST00000375703 USP25Q9UHP3 1055 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 NEXNQ0ZGT2 675 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 ST3GAL1Q11201 340 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
MSH5-201ENST00000375703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
MSH5-201ENST00000375703 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
MSH5-201ENST00000375703 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
MSH5-201ENST00000375703 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
MSH5-201ENST00000375703 MYL6BP14649 208 aa17.37■□□□□ 0.37
MSH5-201ENST00000375703 RNF20Q5VTR2 975 aa17.37■□□□□ 0.37
MSH5-201ENST00000375703 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
MSH5-201ENST00000375703 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
MSH5-201ENST00000375703 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
MSH5-201ENST00000375703 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
MSH5-201ENST00000375703 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
MSH5-201ENST00000375703 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
MSH5-201ENST00000375703 ADCY5O95622 1261 aa17.36■□□□□ 0.37
MSH5-201ENST00000375703 NEURL1BA8MQ27 555 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
MSH5-201ENST00000375703 KIAA2012Q0VF49 1180 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 GCKRQ14397 625 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 MPNDQ8N594 471 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 PODXL2Q9NZ53 605 aa17.35■□□□□ 0.37
MSH5-201ENST00000375703 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 KLHL34Q8N239 644 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 KDM4AO75164 1064 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
MSH5-201ENST00000375703 MYD88Q99836 296 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 FUCA2Q9BTY2 467 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
MSH5-201ENST00000375703 PDCP20941 246 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
MSH5-201ENST00000375703 EPHA10Q5JZY3 1008 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 TCEANC2Q96MN5 208 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 ZNF830Q96NB3 372 aaPredicted RBP17.33■□□□□ 0.36
MSH5-201ENST00000375703 METTL22Q9BUU2 404 aaPredicted RBP17.33■□□□□ 0.36
MSH5-201ENST00000375703 SLIT3O75094 1523 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 UQCRHLA0A096LP55 91 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 UQCRHP07919 91 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 RPS6KB1P23443 525 aa17.33■□□□□ 0.36
MSH5-201ENST00000375703 KRT85P78386 507 aa17.32■□□□□ 0.36
MSH5-201ENST00000375703 ALDH8A1Q9H2A2 487 aaPredicted RBP17.32■□□□□ 0.36
MSH5-201ENST00000375703 RBM10P98175 930 aaKnown RBP17.32■□□□□ 0.36
MSH5-201ENST00000375703 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
MSH5-201ENST00000375703 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
MSH5-201ENST00000375703 ZNF589Q86UQ0 364 aaPredicted RBP17.32■□□□□ 0.36
MSH5-201ENST00000375703 FERMT3Q86UX7 667 aa17.32■□□□□ 0.36
MSH5-201ENST00000375703 CDC37L1Q7L3B6 337 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 ERBB3P21860 1342 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
MSH5-201ENST00000375703 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
MSH5-201ENST00000375703 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
MSH5-201ENST00000375703 TAF5LO75529 589 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
MSH5-201ENST00000375703 TSGA10IPQ3SY00 556 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 COPRSQ9NQ92 184 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
MSH5-201ENST00000375703 NPHP3Q7Z494 1330 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
MSH5-201ENST00000375703 ZNF496Q96IT1 587 aaPredicted RBP17.3■□□□□ 0.36
MSH5-201ENST00000375703 CCDC192P0DO97 292 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
MSH5-201ENST00000375703 ATP5JP18859 108 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 DNTTIP2Q5QJE6 756 aaKnown RBP17.29■□□□□ 0.36
MSH5-201ENST00000375703 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 TTC12Q9H892 705 aaPredicted RBP17.29■□□□□ 0.36
MSH5-201ENST00000375703 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 PHKG2P15735 406 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 STK3Q13188 491 aa17.29■□□□□ 0.36
MSH5-201ENST00000375703 FAM13BQ9NYF5 915 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms