RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
TUBGCP3-202ENST00000375669 CBX8Q9HC52 389 aa21.22■□□□□ 0.99
TUBGCP3-202ENST00000375669 ST7Q9NRC1 585 aa21.22■□□□□ 0.99
TUBGCP3-202ENST00000375669 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.22■□□□□ 0.99
TUBGCP3-202ENST00000375669 V9GYY5 206 aaPredicted RBP21.22■□□□□ 0.99
TUBGCP3-202ENST00000375669 EPB41L2O43491 1005 aaKnown RBP21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 NLRP6P59044 892 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 NUP62CLQ9H1M0 184 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 POLA2Q14181 598 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 SLFNL1Q499Z3 407 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 TSPYL1Q9H0U9 437 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 LGR6Q9HBX8 967 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 OVOS2A0A0J9YW53 1432 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 OVOS2Q6IE36 1432 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 NEO1Q92859 1461 aa21.21■□□□□ 0.99
TUBGCP3-202ENST00000375669 ARID5BQ14865 1188 aa21.2■□□□□ 0.99
TUBGCP3-202ENST00000375669 FBXW7Q969H0 707 aa21.2■□□□□ 0.99
TUBGCP3-202ENST00000375669 ERO1AQ96HE7 468 aa21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 CCDC8Q9H0W5 538 aaPredicted RBP21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 TNMDQ9H2S6 317 aa21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 RBM8AQ9Y5S9 174 aaKnown RBP21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 GOLGA6L4A6NEF3 574 aa21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 CHGBP05060 677 aa21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 DNAJC25Q9H1X3 360 aa21.2■□□□□ 0.98
TUBGCP3-202ENST00000375669 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 CYP2C19P33261 490 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 ELF2Q15723 593 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 SIL1Q9H173 461 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 NR1I2O75469 434 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 EDC3Q96F86 508 aaKnown RBP21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 NDUFB9Q9Y6M9 179 aa21.19■□□□□ 0.98
TUBGCP3-202ENST00000375669 C3P01024 1663 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 CWF19L2Q2TBE0 894 aaKnown RBP21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 ZSWIM6Q9HCJ5 1215 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 USP6P35125 1406 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 KRT85P78386 507 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 AACSQ86V21 672 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 CLASRPQ8N2M8 674 aaKnown RBP21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 KLHDC4Q8TBB5 520 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 TLR7Q9NYK1 1049 aaKnown RBP21.18■□□□□ 0.98
TUBGCP3-202ENST00000375669 PTPN14Q15678 1187 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 CCDC144BQ3MJ40 725 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 CREB3L3Q68CJ9 461 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 CCDC144CPQ8IYA2 1237 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 TDRD7Q8NHU6 1098 aaKnown RBP21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 ERCC4Q92889 916 aaPredicted RBP21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 AOX1Q06278 1338 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 IFIT2P09913 472 aaKnown RBP21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 HNRNPH2P55795 449 aaKnown RBP21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 BOLA2Q9H3K6 86 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 ZNF446Q9NWS9 450 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 IGSF1Q8N6C5 1336 aa21.17■□□□□ 0.98
TUBGCP3-202ENST00000375669 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 GLRX3O76003 335 aaKnown RBP21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 BEND3Q5T5X7 828 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 NYAP1Q6ZVC0 841 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 SPATA32Q96LK8 384 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 USP27XA6NNY8 438 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 JAK2O60674 1132 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 ZKSCAN1P17029 563 aaPredicted RBP21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 NMIQ13287 307 aaPredicted RBP21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 DNAAF4Q8WXU2 420 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 FLT4P35916 1363 aa21.16■□□□□ 0.98
TUBGCP3-202ENST00000375669 PRAMEF22A3QJZ6 481 aa21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 BMS1Q14692 1282 aaKnown RBP21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 NECTIN1Q15223 517 aa21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 BICD2Q8TD16 824 aa21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 MON2Q7Z3U7 1717 aa21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 ESF1Q9H501 851 aaKnown RBP21.15■□□□□ 0.98
TUBGCP3-202ENST00000375669 RICTORQ6R327 1708 aa21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 NPHP1O15259 732 aa21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 LRRC8AQ8IWT6 810 aa21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 LRRC2Q9BYS8 371 aa21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 FTOQ9C0B1 505 aaKnown RBP eCLIP21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 C9orf78Q9NZ63 289 aaPredicted RBP21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.98
TUBGCP3-202ENST00000375669 A0A0D9SFI3 127 aa21.14■□□□□ 0.97
TUBGCP3-202ENST00000375669 SLU7O95391 586 aaKnown RBP21.14■□□□□ 0.97
TUBGCP3-202ENST00000375669 ECHDC1Q9NTX5 307 aa21.14■□□□□ 0.97
TUBGCP3-202ENST00000375669 FEZ2Q9UHY8 353 aaPredicted RBP21.14■□□□□ 0.97
TUBGCP3-202ENST00000375669 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.97
TUBGCP3-202ENST00000375669 PLEKHG3A1L390 1219 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 CDC25BP30305 580 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 RNF20Q5VTR2 975 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 SYTL4Q96C24 671 aaPredicted RBP21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 ERBB3P21860 1342 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 ZNF165P49910 485 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
TUBGCP3-202ENST00000375669 SLC27A2O14975 620 aa21.12■□□□□ 0.97
TUBGCP3-202ENST00000375669 NEMFO60524 1076 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms