RNA–Protein interactions for RNA: ENST00000374969.6

CERKL-203, Transcript of ceramide kinase like, humanhuman

TSL 1 (best) BASIC

Gene CERKL, Length 1,330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-203ENST00000374969 SLX4Q8IY92 1834 aa27.11■■□□□ 1.93
CERKL-203ENST00000374969 ELL2O00472 640 aaPredicted RBP27.1■■□□□ 1.93
CERKL-203ENST00000374969 KIF3CO14782 793 aa27.1■■□□□ 1.93
CERKL-203ENST00000374969 HOXA10P31260 410 aaPredicted RBP27.1■■□□□ 1.93
CERKL-203ENST00000374969 ARFGEF2Q9Y6D5 1785 aa27.09■■□□□ 1.93
CERKL-203ENST00000374969 ZNF219Q9P2Y4 722 aaPredicted RBP27.09■■□□□ 1.93
CERKL-203ENST00000374969 SENP3-EIF4A1A0A087X0R7 540 aa27.08■■□□□ 1.93
CERKL-203ENST00000374969 WDR63Q8IWG1 891 aa27.08■■□□□ 1.93
CERKL-203ENST00000374969 TSPYL6Q8N831 410 aa27.08■■□□□ 1.93
CERKL-203ENST00000374969 TNRC6CQ9HCJ0 1690 aaKnown RBP27.07■■□□□ 1.92
CERKL-203ENST00000374969 TSR2Q969E8 191 aaKnown RBP27.07■■□□□ 1.92
CERKL-203ENST00000374969 ISCA1Q9BUE6 129 aa27.06■■□□□ 1.92
CERKL-203ENST00000374969 TAOK3Q9H2K8 898 aa27.06■■□□□ 1.92
CERKL-203ENST00000374969 FER1L6Q2WGJ9 1857 aa27.06■■□□□ 1.92
CERKL-203ENST00000374969 TRIM28Q13263 835 aaKnown RBP27.05■■□□□ 1.92
CERKL-203ENST00000374969 CCDC93Q567U6 631 aa27.05■■□□□ 1.92
CERKL-203ENST00000374969 CCDC30Q5VVM6 783 aa27.05■■□□□ 1.92
CERKL-203ENST00000374969 C3orf67Q6ZVT6 689 aa27.04■■□□□ 1.92
CERKL-203ENST00000374969 FAM9BQ8IZU0 186 aa27.04■■□□□ 1.92
CERKL-203ENST00000374969 NLRP3Q96P20 1036 aa27.04■■□□□ 1.92
CERKL-203ENST00000374969 CRAMP1Q96RY5 1269 aa27.04■■□□□ 1.92
CERKL-203ENST00000374969 PHAXQ9H814 394 aaKnown RBP27.04■■□□□ 1.92
CERKL-203ENST00000374969 KDM2BQ8NHM5 1336 aa27.03■■□□□ 1.92
CERKL-203ENST00000374969 RPGRQ92834 1020 aaKnown RBP27.02■■□□□ 1.92
CERKL-203ENST00000374969 NMRK2Q9NPI5 230 aa27.02■■□□□ 1.92
CERKL-203ENST00000374969 TRMT112Q9UI30 125 aaKnown RBP27.02■■□□□ 1.92
CERKL-203ENST00000374969 ANKRD36CQ5JPF3 1778 aa27.02■■□□□ 1.92
CERKL-203ENST00000374969 RTKN2Q8IZC4 609 aa27.01■■□□□ 1.91
CERKL-203ENST00000374969 RBM17Q96I25 401 aaKnown RBP27.01■■□□□ 1.91
CERKL-203ENST00000374969 SH3TC1Q8TE82 1336 aa27.01■■□□□ 1.91
CERKL-203ENST00000374969 SNED1Q8TER0 1413 aa27.01■■□□□ 1.91
CERKL-203ENST00000374969 GLTPD2A6NH11 291 aa27■■□□□ 1.91
CERKL-203ENST00000374969 CC2D2BQ6DHV5 1058 aa27■■□□□ 1.91
CERKL-203ENST00000374969 SYNE4Q8N205 404 aa27■■□□□ 1.91
CERKL-203ENST00000374969 FKBP4Q02790 459 aaKnown RBP eCLIP26.99■■□□□ 1.91
CERKL-203ENST00000374969 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
CERKL-203ENST00000374969 TWISTNBQ3B726 338 aaPredicted RBP26.99■■□□□ 1.91
CERKL-203ENST00000374969 OLFM4Q6UX06 510 aa26.99■■□□□ 1.91
CERKL-203ENST00000374969 FANCIQ9NVI1 1328 aa26.99■■□□□ 1.91
CERKL-203ENST00000374969 RIC3Q7Z5B4 369 aa26.98■■□□□ 1.91
CERKL-203ENST00000374969 SALL2Q9Y467 1007 aaPredicted RBP26.98■■□□□ 1.91
CERKL-203ENST00000374969 ATP5J2-PTCD1G3V325 749 aa26.97■■□□□ 1.91
CERKL-203ENST00000374969 HCLS1P14317 486 aaPredicted RBP26.97■■□□□ 1.91
CERKL-203ENST00000374969 GRIPAP1Q4V328 841 aa26.97■■□□□ 1.91
CERKL-203ENST00000374969 CACNA1SQ13698 1873 aa26.97■■□□□ 1.91
CERKL-203ENST00000374969 TOMM70O94826 608 aa26.96■■□□□ 1.91
CERKL-203ENST00000374969 PSMD1Q99460 953 aa26.96■■□□□ 1.91
CERKL-203ENST00000374969 DDX58O95786 925 aaKnown RBP26.94■■□□□ 1.9
CERKL-203ENST00000374969 STK31Q9BXU1 1019 aa26.94■■□□□ 1.9
CERKL-203ENST00000374969 SPINK5Q9NQ38 1064 aaPredicted RBP26.94■■□□□ 1.9
CERKL-203ENST00000374969 ZNF521Q96K83 1311 aa26.94■■□□□ 1.9
CERKL-203ENST00000374969 DPY19L2Q6NUT2 758 aa26.93■■□□□ 1.9
CERKL-203ENST00000374969 FAM89AQ96GI7 184 aa26.93■■□□□ 1.9
CERKL-203ENST00000374969 METTL22Q9BUU2 404 aaPredicted RBP26.93■■□□□ 1.9
CERKL-203ENST00000374969 RRAGCQ9HB90 399 aa26.93■■□□□ 1.9
CERKL-203ENST00000374969 CCDC88AQ3V6T2 1871 aa26.93■■□□□ 1.9
CERKL-203ENST00000374969 DICER1Q9UPY3 1922 aaKnown RBP26.93■■□□□ 1.9
CERKL-203ENST00000374969 PPEF1O14829 653 aaPredicted RBP26.92■■□□□ 1.9
CERKL-203ENST00000374969 VAMP4O75379 141 aa26.92■■□□□ 1.9
CERKL-203ENST00000374969 CCDC191Q8NCU4 936 aa26.92■■□□□ 1.9
CERKL-203ENST00000374969 ABCC4O15439 1325 aa26.92■■□□□ 1.9
CERKL-203ENST00000374969 BBOX1O75936 387 aa26.91■■□□□ 1.9
CERKL-203ENST00000374969 SF3B3Q15393 1217 aaKnown RBP26.91■■□□□ 1.9
CERKL-203ENST00000374969 KSR2Q6VAB6 950 aa26.91■■□□□ 1.9
CERKL-203ENST00000374969 ZNF277Q9NRM2 450 aaPredicted RBP26.91■■□□□ 1.9
CERKL-203ENST00000374969 ATP6V0A2Q9Y487 856 aa26.91■■□□□ 1.9
CERKL-203ENST00000374969 TIAM2Q8IVF5 1701 aa26.91■■□□□ 1.9
CERKL-203ENST00000374969 SLC4A2P04920 1241 aa26.9■■□□□ 1.9
CERKL-203ENST00000374969 ZBTB38Q8NAP3 1195 aaPredicted RBP26.9■■□□□ 1.9
CERKL-203ENST00000374969 MYD88Q99836 296 aa26.9■■□□□ 1.9
CERKL-203ENST00000374969 RBM46Q8TBY0 533 aaKnown RBP26.9■■□□□ 1.9
CERKL-203ENST00000374969 MYH16Q9H6N6 1097 aa26.9■■□□□ 1.9
CERKL-203ENST00000374969 PI4KAP2A4QPH2 592 aa26.89■■□□□ 1.89
CERKL-203ENST00000374969 POTECB2RU33 542 aa26.89■■□□□ 1.89
CERKL-203ENST00000374969 VEGFAP15692 232 aaPredicted RBP26.89■■□□□ 1.89
CERKL-203ENST00000374969 IARSP41252 1262 aaKnown RBP26.89■■□□□ 1.89
CERKL-203ENST00000374969 EXOSC9Q06265 439 aaKnown RBP26.89■■□□□ 1.89
CERKL-203ENST00000374969 DDX46Q7L014 1031 aaKnown RBP26.89■■□□□ 1.89
CERKL-203ENST00000374969 PI4KAP1Q8N8J0 262 aa26.89■■□□□ 1.89
CERKL-203ENST00000374969 ZNF428Q96B54 188 aa26.89■■□□□ 1.89
CERKL-203ENST00000374969 MAP3K2Q9Y2U5 619 aa26.89■■□□□ 1.89
CERKL-203ENST00000374969 IRS4O14654 1257 aaPredicted RBP26.88■■□□□ 1.89
CERKL-203ENST00000374969 TCERG1O14776 1098 aaKnown RBP26.88■■□□□ 1.89
CERKL-203ENST00000374969 GRAPQ13588 217 aa26.88■■□□□ 1.89
CERKL-203ENST00000374969 G2E3Q7L622 706 aa26.88■■□□□ 1.89
CERKL-203ENST00000374969 SP8Q8IXZ3 490 aa26.88■■□□□ 1.89
CERKL-203ENST00000374969 GRAPLQ8TC17 118 aaPredicted RBP26.88■■□□□ 1.89
CERKL-203ENST00000374969 CCER2I3L3R5 266 aa26.87■■□□□ 1.89
CERKL-203ENST00000374969 PCCAP05165 728 aaPredicted RBP26.87■■□□□ 1.89
CERKL-203ENST00000374969 SLC51AQ86UW1 340 aa26.87■■□□□ 1.89
CERKL-203ENST00000374969 CWC25Q9NXE8 425 aaPredicted RBP26.87■■□□□ 1.89
CERKL-203ENST00000374969 HSPA6P17066 643 aa26.86■■□□□ 1.89
CERKL-203ENST00000374969 LAMB2P55268 1798 aa26.85■■□□□ 1.89
CERKL-203ENST00000374969 WDR90Q96KV7 1748 aa26.85■■□□□ 1.89
CERKL-203ENST00000374969 FZD9O00144 591 aa26.85■■□□□ 1.89
CERKL-203ENST00000374969 IGKV5-2P06315 115 aa26.85■■□□□ 1.89
CERKL-203ENST00000374969 HSP90B1P14625 803 aaKnown RBP26.85■■□□□ 1.89
CERKL-203ENST00000374969 TMC4Q7Z404 712 aa26.85■■□□□ 1.89
CERKL-203ENST00000374969 C16orf71Q8IYS4 520 aaPredicted RBP26.85■■□□□ 1.89
CERKL-203ENST00000374969 RTFDC1Q9BY42 306 aaPredicted RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms