RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 NPR1P16066 1061 aa30.24■■■□□ 2.43
CITED4-201ENST00000372638 COL11A2P13942 1736 aaPredicted RBP30.24■■■□□ 2.43
CITED4-201ENST00000372638 RNF123Q5XPI4 1314 aa30.24■■■□□ 2.43
CITED4-201ENST00000372638 ABCC12Q96J65 1359 aa30.24■■■□□ 2.43
CITED4-201ENST00000372638 ZNF784Q8NCA9 323 aaPredicted RBP30.23■■■□□ 2.43
CITED4-201ENST00000372638 TRMT112Q9UI30 125 aaKnown RBP30.23■■■□□ 2.43
CITED4-201ENST00000372638 ATP5J2-PTCD1G3V325 749 aa30.22■■■□□ 2.43
CITED4-201ENST00000372638 SLFN5Q08AF3 891 aa30.22■■■□□ 2.43
CITED4-201ENST00000372638 TRIM28Q13263 835 aaKnown RBP30.22■■■□□ 2.43
CITED4-201ENST00000372638 SLC10A5Q5PT55 438 aa30.22■■■□□ 2.43
CITED4-201ENST00000372638 CACNA1FO60840 1977 aa30.22■■■□□ 2.43
CITED4-201ENST00000372638 RIC1Q4ADV7 1423 aa30.22■■■□□ 2.43
CITED4-201ENST00000372638 ARFGEF2Q9Y6D5 1785 aa30.21■■■□□ 2.43
CITED4-201ENST00000372638 GOLGB1Q14789 3259 aaKnown RBP30.21■■■□□ 2.43
CITED4-201ENST00000372638 KSR2Q6VAB6 950 aa30.21■■■□□ 2.43
CITED4-201ENST00000372638 G2E3Q7L622 706 aa30.21■■■□□ 2.43
CITED4-201ENST00000372638 UTRNP46939 3433 aa30.2■■■□□ 2.43
CITED4-201ENST00000372638 NLRP3Q96P20 1036 aa30.2■■■□□ 2.42
CITED4-201ENST00000372638 METTL22Q9BUU2 404 aaPredicted RBP30.2■■■□□ 2.42
CITED4-201ENST00000372638 SH3TC1Q8TE82 1336 aa30.2■■■□□ 2.42
CITED4-201ENST00000372638 PI4KAP2A4QPH2 592 aa30.19■■■□□ 2.42
CITED4-201ENST00000372638 CRY2Q49AN0 593 aa30.19■■■□□ 2.42
CITED4-201ENST00000372638 PI4KAP1Q8N8J0 262 aa30.19■■■□□ 2.42
CITED4-201ENST00000372638 MYD88Q99836 296 aa30.19■■■□□ 2.42
CITED4-201ENST00000372638 MAP3K2Q9Y2U5 619 aa30.19■■■□□ 2.42
CITED4-201ENST00000372638 ALDH1B1P30837 517 aa30.18■■■□□ 2.42
CITED4-201ENST00000372638 FLIIQ13045 1269 aa30.18■■■□□ 2.42
CITED4-201ENST00000372638 PRPF40BQ6NWY9 871 aaKnown RBP30.18■■■□□ 2.42
CITED4-201ENST00000372638 CDCA7LQ96GN5 454 aa30.18■■■□□ 2.42
CITED4-201ENST00000372638 TNRC6CQ9HCJ0 1690 aaKnown RBP30.16■■■□□ 2.42
CITED4-201ENST00000372638 C21orf2O43822 256 aa30.16■■■□□ 2.42
CITED4-201ENST00000372638 RPGRQ92834 1020 aaKnown RBP30.16■■■□□ 2.42
CITED4-201ENST00000372638 ZNF219Q9P2Y4 722 aaPredicted RBP30.16■■■□□ 2.42
CITED4-201ENST00000372638 SYNE4Q8N205 404 aa30.15■■■□□ 2.42
CITED4-201ENST00000372638 CCDC191Q8NCU4 936 aa30.15■■■□□ 2.42
CITED4-201ENST00000372638 ZNF428Q96B54 188 aa30.15■■■□□ 2.42
CITED4-201ENST00000372638 SLX4Q8IY92 1834 aa30.14■■■□□ 2.42
CITED4-201ENST00000372638 HCLS1P14317 486 aaPredicted RBP30.14■■■□□ 2.42
CITED4-201ENST00000372638 HOXA10P31260 410 aaPredicted RBP30.14■■■□□ 2.42
CITED4-201ENST00000372638 ADCY9O60503 1353 aa30.13■■■□□ 2.41
CITED4-201ENST00000372638 NEXNQ0ZGT2 675 aa30.13■■■□□ 2.41
CITED4-201ENST00000372638 FKBP5Q13451 457 aaPredicted RBP30.13■■■□□ 2.41
CITED4-201ENST00000372638 SOGA3Q5TF21 947 aa30.13■■■□□ 2.41
CITED4-201ENST00000372638 TRMT2AQ8IZ69 625 aaKnown RBP30.13■■■□□ 2.41
CITED4-201ENST00000372638 FAM89AQ96GI7 184 aa30.13■■■□□ 2.41
CITED4-201ENST00000372638 RBM17Q96I25 401 aaKnown RBP30.13■■■□□ 2.41
CITED4-201ENST00000372638 CACNA1SQ13698 1873 aa30.13■■■□□ 2.41
CITED4-201ENST00000372638 C3orf67Q6ZVT6 689 aa30.12■■■□□ 2.41
CITED4-201ENST00000372638 CRAMP1Q96RY5 1269 aa30.11■■■□□ 2.41
CITED4-201ENST00000372638 CWC25Q9NXE8 425 aaPredicted RBP30.11■■■□□ 2.41
CITED4-201ENST00000372638 ZBTB38Q8NAP3 1195 aaPredicted RBP30.1■■■□□ 2.41
CITED4-201ENST00000372638 C7orf43Q8WVR3 580 aa30.1■■■□□ 2.41
CITED4-201ENST00000372638 HNRNPUQ00839 825 aaKnown RBP eCLIP30.08■■■□□ 2.41
CITED4-201ENST00000372638 RTL5Q5HYW3 569 aaPredicted RBP30.08■■■□□ 2.41
CITED4-201ENST00000372638 C9orf131Q5VYM1 1079 aa30.08■■■□□ 2.41
CITED4-201ENST00000372638 DNAAF4Q8WXU2 420 aa30.08■■■□□ 2.41
CITED4-201ENST00000372638 PCCAP05165 728 aaPredicted RBP30.07■■■□□ 2.4
CITED4-201ENST00000372638 IGKV5-2P06315 115 aa30.07■■■□□ 2.4
CITED4-201ENST00000372638 HSP90B1P14625 803 aaKnown RBP30.07■■■□□ 2.4
CITED4-201ENST00000372638 RASSF7Q02833 373 aa30.07■■■□□ 2.4
CITED4-201ENST00000372638 NFKBIEO00221 500 aa30.06■■■□□ 2.4
CITED4-201ENST00000372638 IRS4O14654 1257 aaPredicted RBP30.06■■■□□ 2.4
CITED4-201ENST00000372638 SBF1O95248 1867 aa30.06■■■□□ 2.4
CITED4-201ENST00000372638 CCDC93Q567U6 631 aa30.05■■■□□ 2.4
CITED4-201ENST00000372638 RNF181Q9P0P0 153 aa30.05■■■□□ 2.4
CITED4-201ENST00000372638 LMNB1P20700 586 aa30.04■■■□□ 2.4
CITED4-201ENST00000372638 FER1L6Q2WGJ9 1857 aa30.04■■■□□ 2.4
CITED4-201ENST00000372638 LAMB2P55268 1798 aa30.03■■■□□ 2.4
CITED4-201ENST00000372638 NEURL1BA8MQ27 555 aa30.03■■■□□ 2.4
CITED4-201ENST00000372638 CWF19L2Q2TBE0 894 aaKnown RBP30.03■■■□□ 2.4
CITED4-201ENST00000372638 DDX46Q7L014 1031 aaKnown RBP30.03■■■□□ 2.4
CITED4-201ENST00000372638 CT47B1P0C2W7 299 aaPredicted RBP30.02■■■□□ 2.4
CITED4-201ENST00000372638 SF3B3Q15393 1217 aaKnown RBP30.02■■■□□ 2.4
CITED4-201ENST00000372638 CC2D2BQ6DHV5 1058 aa30.02■■■□□ 2.4
CITED4-201ENST00000372638 LINS1Q8NG48 757 aa30.02■■■□□ 2.4
CITED4-201ENST00000372638 TAOK3Q9H2K8 898 aa30.02■■■□□ 2.4
CITED4-201ENST00000372638 DDX60Q8IY21 1712 aaKnown RBP30.02■■■□□ 2.4
CITED4-201ENST00000372638 LTBP3Q9NS15 1303 aa30.02■■■□□ 2.4
CITED4-201ENST00000372638 RTKN2Q8IZC4 609 aa30.01■■■□□ 2.4
CITED4-201ENST00000372638 MRPL50Q8N5N7 158 aaKnown RBP30.01■■■□□ 2.4
CITED4-201ENST00000372638 ABCC4O15439 1325 aa30.01■■■□□ 2.39
CITED4-201ENST00000372638 F6X3S4 739 aa30■■■□□ 2.39
CITED4-201ENST00000372638 BBOX1O75936 387 aa30■■■□□ 2.39
CITED4-201ENST00000372638 SSH1Q8WYL5 1049 aa30■■■□□ 2.39
CITED4-201ENST00000372638 JARID2Q92833 1246 aaPredicted RBP30■■■□□ 2.39
CITED4-201ENST00000372638 PPEF1O14829 653 aaPredicted RBP29.99■■■□□ 2.39
CITED4-201ENST00000372638 PRELPP51888 382 aa29.99■■■□□ 2.39
CITED4-201ENST00000372638 ALDH1L2Q3SY69 923 aa29.99■■■□□ 2.39
CITED4-201ENST00000372638 OLFM4Q6UX06 510 aa29.99■■■□□ 2.39
CITED4-201ENST00000372638 CDHR2Q9BYE9 1310 aa29.99■■■□□ 2.39
CITED4-201ENST00000372638 CCDC88AQ3V6T2 1871 aa29.99■■■□□ 2.39
CITED4-201ENST00000372638 PDE8AO60658 829 aa29.98■■■□□ 2.39
CITED4-201ENST00000372638 C1QTNF8P60827 252 aa29.98■■■□□ 2.39
CITED4-201ENST00000372638 TMX4Q9H1E5 349 aaPredicted RBP29.98■■■□□ 2.39
CITED4-201ENST00000372638 GRAPQ13588 217 aa29.97■■■□□ 2.39
CITED4-201ENST00000372638 GCKRQ14397 625 aa29.97■■■□□ 2.39
CITED4-201ENST00000372638 GRIPAP1Q4V328 841 aa29.97■■■□□ 2.39
CITED4-201ENST00000372638 GRAPLQ8TC17 118 aaPredicted RBP29.97■■■□□ 2.39
CITED4-201ENST00000372638 H7C1W4 665 aa29.96■■■□□ 2.39
CITED4-201ENST00000372638 FKBP4Q02790 459 aaKnown RBP eCLIP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms