RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 MYH16Q9H6N6 1097 aa25.79■■□□□ 1.72
TMEM53-205ENST00000372244 RIC1Q4ADV7 1423 aa25.79■■□□□ 1.72
TMEM53-205ENST00000372244 RNF123Q5XPI4 1314 aa25.79■■□□□ 1.72
TMEM53-205ENST00000372244 EXOSC9Q06265 439 aaKnown RBP25.79■■□□□ 1.72
TMEM53-205ENST00000372244 PRPF40BQ6NWY9 871 aaKnown RBP25.79■■□□□ 1.72
TMEM53-205ENST00000372244 COL11A2P13942 1736 aaPredicted RBP25.77■■□□□ 1.72
TMEM53-205ENST00000372244 C21orf2O43822 256 aa25.77■■□□□ 1.72
TMEM53-205ENST00000372244 HOXA10P31260 410 aaPredicted RBP25.77■■□□□ 1.72
TMEM53-205ENST00000372244 RIC3Q7Z5B4 369 aa25.77■■□□□ 1.72
TMEM53-205ENST00000372244 STK31Q9BXU1 1019 aa25.77■■□□□ 1.72
TMEM53-205ENST00000372244 SLC4A2P04920 1241 aa25.76■■□□□ 1.71
TMEM53-205ENST00000372244 ALDH1B1P30837 517 aa25.76■■□□□ 1.71
TMEM53-205ENST00000372244 MIER1Q8N108 512 aa25.76■■□□□ 1.71
TMEM53-205ENST00000372244 TRMT112Q9UI30 125 aaKnown RBP25.76■■□□□ 1.71
TMEM53-205ENST00000372244 ATP5J2-PTCD1G3V325 749 aa25.75■■□□□ 1.71
TMEM53-205ENST00000372244 TCERG1O14776 1098 aaKnown RBP25.75■■□□□ 1.71
TMEM53-205ENST00000372244 C9orf131Q5VYM1 1079 aa25.75■■□□□ 1.71
TMEM53-205ENST00000372244 C3orf67Q6ZVT6 689 aa25.75■■□□□ 1.71
TMEM53-205ENST00000372244 SYNE4Q8N205 404 aa25.75■■□□□ 1.71
TMEM53-205ENST00000372244 NLRP3Q96P20 1036 aa25.74■■□□□ 1.71
TMEM53-205ENST00000372244 NFKBIEO00221 500 aa25.73■■□□□ 1.71
TMEM53-205ENST00000372244 DDX58O95786 925 aaKnown RBP25.73■■□□□ 1.71
TMEM53-205ENST00000372244 SLX4Q8IY92 1834 aa25.73■■□□□ 1.71
TMEM53-205ENST00000372244 SH3TC1Q8TE82 1336 aa25.73■■□□□ 1.71
TMEM53-205ENST00000372244 PRELPP51888 382 aa25.72■■□□□ 1.71
TMEM53-205ENST00000372244 KSR2Q6VAB6 950 aa25.72■■□□□ 1.71
TMEM53-205ENST00000372244 G2E3Q7L622 706 aa25.72■■□□□ 1.71
TMEM53-205ENST00000372244 ZNF219Q9P2Y4 722 aaPredicted RBP25.72■■□□□ 1.71
TMEM53-205ENST00000372244 SOGA3Q5TF21 947 aa25.72■■□□□ 1.71
TMEM53-205ENST00000372244 METTL22Q9BUU2 404 aaPredicted RBP25.72■■□□□ 1.71
TMEM53-205ENST00000372244 PI4KAP2A4QPH2 592 aa25.71■■□□□ 1.71
TMEM53-205ENST00000372244 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
TMEM53-205ENST00000372244 RASSF7Q02833 373 aa25.71■■□□□ 1.71
TMEM53-205ENST00000372244 PI4KAP1Q8N8J0 262 aa25.71■■□□□ 1.71
TMEM53-205ENST00000372244 CRAMP1Q96RY5 1269 aa25.71■■□□□ 1.71
TMEM53-205ENST00000372244 LMNB1P20700 586 aa25.7■■□□□ 1.7
TMEM53-205ENST00000372244 RPGRQ92834 1020 aaKnown RBP25.7■■□□□ 1.7
TMEM53-205ENST00000372244 MAP3K2Q9Y2U5 619 aa25.7■■□□□ 1.7
TMEM53-205ENST00000372244 TNRC6CQ9HCJ0 1690 aaKnown RBP25.69■■□□□ 1.7
TMEM53-205ENST00000372244 ANKRD36CQ5JPF3 1778 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 CCDC191Q8NCU4 936 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 FAM89AQ96GI7 184 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 RBM17Q96I25 401 aaKnown RBP25.69■■□□□ 1.7
TMEM53-205ENST00000372244 MYD88Q99836 296 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 RNF181Q9P0P0 153 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 LTBP3Q9NS15 1303 aa25.69■■□□□ 1.7
TMEM53-205ENST00000372244 E9PSI1 815 aa25.68■■□□□ 1.7
TMEM53-205ENST00000372244 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
TMEM53-205ENST00000372244 ZNF428Q96B54 188 aa25.68■■□□□ 1.7
TMEM53-205ENST00000372244 FLIIQ13045 1269 aa25.66■■□□□ 1.7
TMEM53-205ENST00000372244 ZBTB38Q8NAP3 1195 aaPredicted RBP25.66■■□□□ 1.7
TMEM53-205ENST00000372244 SBF1O95248 1867 aa25.66■■□□□ 1.7
TMEM53-205ENST00000372244 OLFM4Q6UX06 510 aa25.66■■□□□ 1.7
TMEM53-205ENST00000372244 IGKV5-2P06315 115 aa25.65■■□□□ 1.7
TMEM53-205ENST00000372244 CCDC93Q567U6 631 aa25.65■■□□□ 1.7
TMEM53-205ENST00000372244 TRMT2AQ8IZ69 625 aaKnown RBP25.65■■□□□ 1.7
TMEM53-205ENST00000372244 RTKN2Q8IZC4 609 aa25.65■■□□□ 1.7
TMEM53-205ENST00000372244 TAOK3Q9H2K8 898 aa25.65■■□□□ 1.7
TMEM53-205ENST00000372244 GPBP1L1Q9HC44 474 aaPredicted RBP25.65■■□□□ 1.7
TMEM53-205ENST00000372244 ARFGEF2Q9Y6D5 1785 aa25.64■■□□□ 1.7
TMEM53-205ENST00000372244 CDCA7LQ96GN5 454 aa25.64■■□□□ 1.69
TMEM53-205ENST00000372244 CWC25Q9NXE8 425 aaPredicted RBP25.64■■□□□ 1.69
TMEM53-205ENST00000372244 PCCAP05165 728 aaPredicted RBP25.63■■□□□ 1.69
TMEM53-205ENST00000372244 SF3B3Q15393 1217 aaKnown RBP25.63■■□□□ 1.69
TMEM53-205ENST00000372244 CC2D2BQ6DHV5 1058 aa25.63■■□□□ 1.69
TMEM53-205ENST00000372244 FER1L6Q2WGJ9 1857 aa25.63■■□□□ 1.69
TMEM53-205ENST00000372244 ZC3H4Q9UPT8 1303 aaKnown RBP25.63■■□□□ 1.69
TMEM53-205ENST00000372244 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
TMEM53-205ENST00000372244 BBOX1O75936 387 aa25.62■■□□□ 1.69
TMEM53-205ENST00000372244 RTL5Q5HYW3 569 aaPredicted RBP25.62■■□□□ 1.69
TMEM53-205ENST00000372244 ZNF526Q8TF50 670 aaPredicted RBP25.62■■□□□ 1.69
TMEM53-205ENST00000372244 FKBP4Q02790 459 aaKnown RBP eCLIP25.6■■□□□ 1.69
TMEM53-205ENST00000372244 NEXNQ0ZGT2 675 aa25.6■■□□□ 1.69
TMEM53-205ENST00000372244 FKBP5Q13451 457 aaPredicted RBP25.6■■□□□ 1.69
TMEM53-205ENST00000372244 GRIPAP1Q4V328 841 aa25.6■■□□□ 1.69
TMEM53-205ENST00000372244 CACNA1FO60840 1977 aa25.6■■□□□ 1.69
TMEM53-205ENST00000372244 ABCC4O15439 1325 aa25.6■■□□□ 1.69
TMEM53-205ENST00000372244 SNED1Q8TER0 1413 aa25.6■■□□□ 1.69
TMEM53-205ENST00000372244 DDX46Q7L014 1031 aaKnown RBP25.6■■□□□ 1.69
TMEM53-205ENST00000372244 NEURL1BA8MQ27 555 aa25.59■■□□□ 1.69
TMEM53-205ENST00000372244 PPEF1O14829 653 aaPredicted RBP25.59■■□□□ 1.69
TMEM53-205ENST00000372244 HSP90B1P14625 803 aaKnown RBP25.59■■□□□ 1.69
TMEM53-205ENST00000372244 DNAAF4Q8WXU2 420 aa25.59■■□□□ 1.69
TMEM53-205ENST00000372244 ATP6V0A2Q9Y487 856 aa25.59■■□□□ 1.69
TMEM53-205ENST00000372244 CWF19L2Q2TBE0 894 aaKnown RBP25.58■■□□□ 1.69
TMEM53-205ENST00000372244 PSMD1Q99460 953 aa25.58■■□□□ 1.69
TMEM53-205ENST00000372244 CACNA1SQ13698 1873 aa25.57■■□□□ 1.68
TMEM53-205ENST00000372244 JARID2Q92833 1246 aaPredicted RBP25.57■■□□□ 1.68
TMEM53-205ENST00000372244 GRAPQ13588 217 aa25.56■■□□□ 1.68
TMEM53-205ENST00000372244 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
TMEM53-205ENST00000372244 SP8Q8IXZ3 490 aa25.56■■□□□ 1.68
TMEM53-205ENST00000372244 GRAPLQ8TC17 118 aaPredicted RBP25.56■■□□□ 1.68
TMEM53-205ENST00000372244 CDHR2Q9BYE9 1310 aa25.55■■□□□ 1.68
TMEM53-205ENST00000372244 H7C1W4 665 aa25.55■■□□□ 1.68
TMEM53-205ENST00000372244 KIF3CO14782 793 aa25.55■■□□□ 1.68
TMEM53-205ENST00000372244 LINS1Q8NG48 757 aa25.55■■□□□ 1.68
TMEM53-205ENST00000372244 ZNF277Q9NRM2 450 aaPredicted RBP25.55■■□□□ 1.68
TMEM53-205ENST00000372244 GLTPD2A6NH11 291 aa25.54■■□□□ 1.68
TMEM53-205ENST00000372244 PDE8AO60658 829 aa25.54■■□□□ 1.68
TMEM53-205ENST00000372244 GCKRQ14397 625 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms