RNA–Protein interactions for RNA: ENST00000371527.5

NKRF-202, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-202ENST00000371527 ARFGEF2Q9Y6D5 1785 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 NUP98P52948 1817 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 GPTP24298 496 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 PPP1R42Q7Z4L9 355 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 NUTM1Q86Y26 1132 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 NECTIN2Q92692 538 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 RNF123Q5XPI4 1314 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 SBF1O95248 1867 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 ALDH1B1P30837 517 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 UTP14AQ9BVJ6 771 aaKnown RBP6.32□□□□□ -1.4
NKRF-202ENST00000371527 DBF4Q9UBU7 674 aaPredicted RBP6.32□□□□□ -1.4
NKRF-202ENST00000371527 SLX4Q8IY92 1834 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 GTF2E1P29083 439 aaPredicted RBP6.32□□□□□ -1.4
NKRF-202ENST00000371527 NLRP10Q86W26 655 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 PLBD2Q8NHP8 589 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 CRAMP1Q96RY5 1269 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 MRS2Q9HD23 443 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 NMRK2Q9NPI5 230 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 HYPKQ9NX55 129 aa6.32□□□□□ -1.4
NKRF-202ENST00000371527 IL16Q14005 1332 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 AIMP1Q12904 312 aaKnown RBP6.31□□□□□ -1.4
NKRF-202ENST00000371527 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 ISCA1Q9BUE6 129 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 ZNF219Q9P2Y4 722 aaPredicted RBP6.31□□□□□ -1.4
NKRF-202ENST00000371527 KDM2BQ8NHM5 1336 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 TNRC6CQ9HCJ0 1690 aaKnown RBP6.31□□□□□ -1.4
NKRF-202ENST00000371527 PDE4CQ08493 712 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 C8orf58Q8NAV2 365 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 TAOK3Q9H2K8 898 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 SNED1Q8TER0 1413 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 FER1L6Q2WGJ9 1857 aa6.31□□□□□ -1.4
NKRF-202ENST00000371527 GLTPD2A6NH11 291 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 PLCB2Q00722 1185 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
NKRF-202ENST00000371527 TRIM28Q13263 835 aaKnown RBP6.3□□□□□ -1.4
NKRF-202ENST00000371527 C3orf67Q6ZVT6 689 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 WWC1Q8IX03 1113 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 RBM17Q96I25 401 aaKnown RBP6.3□□□□□ -1.4
NKRF-202ENST00000371527 FBXO3Q9UK99 471 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 TOMM70O94826 608 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 ANKRD13DQ6ZTN6 518 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 RBM46Q8TBY0 533 aaKnown RBP6.3□□□□□ -1.4
NKRF-202ENST00000371527 CHMP4AQ9BY43 222 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 SENP3-EIF4A1A0A087X0R7 540 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 RRAGCQ9HB90 399 aa6.3□□□□□ -1.4
NKRF-202ENST00000371527 GRIPAP1Q4V328 841 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 RPGRQ92834 1020 aaKnown RBP6.29□□□□□ -1.4
NKRF-202ENST00000371527 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 HSPA6P17066 643 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 SYNE4Q8N205 404 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 PSMD1Q99460 953 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 POTECB2RU33 542 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 CCDC30Q5VVM6 783 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 OLFM4Q6UX06 510 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 TSPYL6Q8N831 410 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 ANKRD36CQ5JPF3 1778 aa6.29□□□□□ -1.4
NKRF-202ENST00000371527 ELL2O00472 640 aaPredicted RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 SH3TC1Q8TE82 1336 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 TRMT112Q9UI30 125 aaKnown RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 FSTL1Q12841 308 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 DPY19L2Q6NUT2 758 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 TSR2Q969E8 191 aaKnown RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 WDR90Q96KV7 1748 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 DICER1Q9UPY3 1922 aaKnown RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 PPEF1O14829 653 aaPredicted RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 BBOX1O75936 387 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 HCLS1P14317 486 aaPredicted RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 VEGFAP15692 232 aaPredicted RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 SF3B3Q15393 1217 aaKnown RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 ZNF277Q9NRM2 450 aaPredicted RBP6.28□□□□□ -1.4
NKRF-202ENST00000371527 TIAM2Q8IVF5 1701 aa6.28□□□□□ -1.4
NKRF-202ENST00000371527 ABCC4O15439 1325 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 IARSP41252 1262 aaKnown RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 RIC3Q7Z5B4 369 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 ATP6V0A2Q9Y487 856 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 ATP5J2-PTCD1G3V325 749 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 SP8Q8IXZ3 490 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 METTL22Q9BUU2 404 aaPredicted RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 RTFDC1Q9BY42 306 aaPredicted RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 FZD9O00144 591 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 GRAPQ13588 217 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 GRAPLQ8TC17 118 aaPredicted RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 L3MBTL3Q96JM7 780 aaPredicted RBP6.27□□□□□ -1.41
NKRF-202ENST00000371527 VPS33BQ9H267 617 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 CCDC88AQ3V6T2 1871 aa6.27□□□□□ -1.41
NKRF-202ENST00000371527 FANCIQ9NVI1 1328 aa6.26□□□□□ -1.41
NKRF-202ENST00000371527 APLP1P51693 650 aa6.26□□□□□ -1.41
NKRF-202ENST00000371527 TWISTNBQ3B726 338 aaPredicted RBP6.26□□□□□ -1.41
NKRF-202ENST00000371527 TMC4Q7Z404 712 aa6.26□□□□□ -1.41
NKRF-202ENST00000371527 CCDC191Q8NCU4 936 aa6.26□□□□□ -1.41
NKRF-202ENST00000371527 CACNA1SQ13698 1873 aa6.26□□□□□ -1.41
NKRF-202ENST00000371527 VAMP4O75379 141 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms