RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CRBNQ96SW2 442 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 DNAJC2Q99543 621 aaKnown RBP8.7□□□□□ -1.02
USP1-202ENST00000371146 UFL1O94874 794 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 SLFN5Q08AF3 891 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 DPP8Q6V1X1 898 aaPredicted RBP8.7□□□□□ -1.02
USP1-202ENST00000371146 SKAP1Q86WV1 359 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 EXOC6Q8TAG9 804 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 MEIS3Q99687 375 aa8.7□□□□□ -1.02
USP1-202ENST00000371146 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 NBPF7P0C2Y1 421 aaPredicted RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 IL6STP40189 918 aaPredicted RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 RASSF7Q02833 373 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 SLC51AQ86UW1 340 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 ANKRD18AQ8IVF6 992 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 WDR63Q8IWG1 891 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 TTLL6Q8N841 843 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 NARFQ9UHQ1 456 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 SLIT2O94813 1529 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 PNPLA7Q6ZV29 1317 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 LAMC1P11047 1609 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 XRN1Q8IZH2 1706 aaKnown RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 WASHC4Q2M389 1173 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 TSHZ3Q63HK5 1081 aa8.69□□□□□ -1.02
USP1-202ENST00000371146 INTS5Q6P9B9 1019 aaKnown RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 CCDC8Q9H0W5 538 aaPredicted RBP8.69□□□□□ -1.02
USP1-202ENST00000371146 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
USP1-202ENST00000371146 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 KSR2Q6VAB6 950 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 TEX2Q8IWB9 1127 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 ATRNO75882 1429 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 RILPL2Q969X0 211 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
USP1-202ENST00000371146 COL15A1P39059 1388 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
USP1-202ENST00000371146 NDUFB9Q9Y6M9 179 aa8.68□□□□□ -1.02
USP1-202ENST00000371146 ANKRD18BA2A2Z9 1011 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 SMARCA5O60264 1052 aaPredicted RBP8.67□□□□□ -1.02
USP1-202ENST00000371146 APPP05067 770 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 CEP126Q9P2H0 1117 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 SSFA2P28290 1259 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 PDE6BP35913 854 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 CCDC152Q4G0S7 254 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 PRR5LQ6MZQ0 368 aa8.67□□□□□ -1.02
USP1-202ENST00000371146 MAP3K15Q6ZN16 1313 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 HTATSF1O43719 755 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 KCNA4P22459 653 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 ITGA6P23229 1130 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 RARSP54136 660 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 TIMM10P62072 90 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 DDR1Q08345 913 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 KIAA0825Q8IV33 1275 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 EIF5P55010 431 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 ATF7IPQ6VMQ6 1270 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 MPNDQ8N594 471 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 PLBD2Q8NHP8 589 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 GREM2Q9H772 168 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 IFIT2P09913 472 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 TRIM27P14373 513 aa8.66□□□□□ -1.02
USP1-202ENST00000371146 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 ZBTB12Q9Y330 459 aaPredicted RBP8.66□□□□□ -1.02
USP1-202ENST00000371146 IDH1O75874 414 aaKnown RBP8.65□□□□□ -1.02
USP1-202ENST00000371146 RPS8P62241 208 aaKnown RBP8.65□□□□□ -1.02
USP1-202ENST00000371146 ATP2B2Q01814 1243 aa8.65□□□□□ -1.02
USP1-202ENST00000371146 PRAMEF18Q5VWM3 479 aa8.65□□□□□ -1.02
USP1-202ENST00000371146 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
USP1-202ENST00000371146 COL16A1Q07092 1604 aaPredicted RBP8.65□□□□□ -1.02
USP1-202ENST00000371146 GRM8O00222 908 aa8.65□□□□□ -1.02
USP1-202ENST00000371146 SCNN1DP51172 638 aa8.65□□□□□ -1.02
USP1-202ENST00000371146 PRPF40BQ6NWY9 871 aaKnown RBP8.65□□□□□ -1.02
USP1-202ENST00000371146 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
USP1-202ENST00000371146 FMN2Q9NZ56 1722 aa8.65□□□□□ -1.03
USP1-202ENST00000371146 WTIPA6NIX2 430 aaPredicted RBP8.64□□□□□ -1.03
USP1-202ENST00000371146 AOC3Q16853 763 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 C9orf131Q5VYM1 1079 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 NLRP10Q86W26 655 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 RBM17Q96I25 401 aaKnown RBP8.64□□□□□ -1.03
USP1-202ENST00000371146 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
USP1-202ENST00000371146 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
USP1-202ENST00000371146 GNAI2P04899 355 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 TNS2Q63HR2 1409 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 GTF2IP78347 998 aa8.64□□□□□ -1.03
USP1-202ENST00000371146 BBXQ8WY36 941 aaPredicted RBP8.64□□□□□ -1.03
USP1-202ENST00000371146 MAP2P11137 1827 aaKnown RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 KDM4AO75164 1064 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 NWD1Q149M9 1564 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 KIF16BQ96L93 1317 aa8.63□□□□□ -1.03
USP1-202ENST00000371146 USP42Q9H9J4 1324 aaKnown RBP8.63□□□□□ -1.03
USP1-202ENST00000371146 RLBP1P12271 317 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms