RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
GPC3-201ENST00000370818 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
GPC3-201ENST00000370818 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.08
GPC3-201ENST00000370818 SGSM2O43147 1006 aa15.52■□□□□ 0.07
GPC3-201ENST00000370818 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.07
GPC3-201ENST00000370818 COL22A1Q8NFW1 1626 aaPredicted RBP15.52■□□□□ 0.07
GPC3-201ENST00000370818 AFDNP55196 1824 aaKnown RBP15.51■□□□□ 0.07
GPC3-201ENST00000370818 H7C1W4 665 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 ST18O60284 1047 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 GAS2L3Q86XJ1 694 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 TLR7Q9NYK1 1049 aaKnown RBP15.51■□□□□ 0.07
GPC3-201ENST00000370818 LTBP4Q8N2S1 1624 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 EPB41L2O43491 1005 aaKnown RBP15.51■□□□□ 0.07
GPC3-201ENST00000370818 GPATCH3Q96I76 525 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
GPC3-201ENST00000370818 ZBTB3Q9H5J0 574 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 ATG3Q9NT62 314 aa15.51■□□□□ 0.07
GPC3-201ENST00000370818 ANAPC15P60006 121 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 NUP188Q5SRE5 1749 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 OFD1O75665 1012 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 MCCP23508 829 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 FOXO4P98177 505 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 RAB3GAP1Q15042 981 aa15.5■□□□□ 0.07
GPC3-201ENST00000370818 CWC25Q9NXE8 425 aaPredicted RBP15.49■□□□□ 0.07
GPC3-201ENST00000370818 DDX11L8A8MPP1 907 aa15.49■□□□□ 0.07
GPC3-201ENST00000370818 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
GPC3-201ENST00000370818 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
GPC3-201ENST00000370818 TNPO1Q92973 898 aaKnown RBP15.49■□□□□ 0.07
GPC3-201ENST00000370818 AK9Q5TCS8 1911 aa15.49■□□□□ 0.07
GPC3-201ENST00000370818 RAD50Q92878 1312 aa15.49■□□□□ 0.07
GPC3-201ENST00000370818 HSPA4P34932 840 aa15.48■□□□□ 0.07
GPC3-201ENST00000370818 NEK4P51957 841 aa15.48■□□□□ 0.07
GPC3-201ENST00000370818 TERF1P54274 439 aa15.48■□□□□ 0.07
GPC3-201ENST00000370818 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
GPC3-201ENST00000370818 LSG1Q9H089 658 aaKnown RBP15.48■□□□□ 0.07
GPC3-201ENST00000370818 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
GPC3-201ENST00000370818 BCL9O00512 1426 aa15.47■□□□□ 0.07
GPC3-201ENST00000370818 EVI5LQ96CN4 794 aa15.47■□□□□ 0.07
GPC3-201ENST00000370818 PLCH1Q4KWH8 1693 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 TFCP2Q12800 502 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 SLC4A9Q96Q91 983 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 MAP7D2Q96T17 732 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 TEX13AQ9BXU3 409 aaPredicted RBP15.46■□□□□ 0.07
GPC3-201ENST00000370818 TJP1Q07157 1748 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 EXOC5O00471 708 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 FGD1P98174 961 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
GPC3-201ENST00000370818 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
GPC3-201ENST00000370818 BOLA2Q9H3K6 86 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 ITGB4P16144 1822 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 ADAMTS2O95450 1211 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 LRP6O75581 1613 aa15.45■□□□□ 0.06
GPC3-201ENST00000370818 STARD3NLO95772 234 aa15.44■□□□□ 0.06
GPC3-201ENST00000370818 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
GPC3-201ENST00000370818 ZGPATQ8N5A5 531 aaKnown RBP15.44■□□□□ 0.06
GPC3-201ENST00000370818 PPP1R9BQ96SB3 815 aa15.44■□□□□ 0.06
GPC3-201ENST00000370818 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
GPC3-201ENST00000370818 TMX3Q96JJ7 454 aa15.44■□□□□ 0.06
GPC3-201ENST00000370818 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
GPC3-201ENST00000370818 SSFA2P28290 1259 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 FAM13BQ9NYF5 915 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 CHMP3Q9Y3E7 222 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 RUFY2Q8WXA3 655 aa15.43■□□□□ 0.06
GPC3-201ENST00000370818 MCM2P49736 904 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 PTH1RQ03431 593 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 TRIM28Q13263 835 aaKnown RBP15.42■□□□□ 0.06
GPC3-201ENST00000370818 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.42■□□□□ 0.06
GPC3-201ENST00000370818 SMAP1Q8IYB5 467 aaPredicted RBP15.42■□□□□ 0.06
GPC3-201ENST00000370818 SNX14Q9Y5W7 946 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 CYP19A1P11511 503 aaPredicted RBP15.42■□□□□ 0.06
GPC3-201ENST00000370818 SYTL4Q96C24 671 aaPredicted RBP15.42■□□□□ 0.06
GPC3-201ENST00000370818 FAM227BQ96M60 508 aa15.42■□□□□ 0.06
GPC3-201ENST00000370818 CYP2E1P05181 493 aaPredicted RBP15.41■□□□□ 0.06
GPC3-201ENST00000370818 ATP5JP18859 108 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 PRIM1P49642 420 aaKnown RBP15.41■□□□□ 0.06
GPC3-201ENST00000370818 CWC22Q9HCG8 908 aaKnown RBP15.41■□□□□ 0.06
GPC3-201ENST00000370818 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
GPC3-201ENST00000370818 PKP1Q13835 747 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 KIF6Q6ZMV9 814 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 CLEC17AQ6ZS10 378 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
GPC3-201ENST00000370818 GBP4Q96PP9 640 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 DBNDD2Q9BQY9 259 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
GPC3-201ENST00000370818 CUL4AQ13619 759 aa15.4■□□□□ 0.06
GPC3-201ENST00000370818 WNK3Q9BYP7 1800 aa15.4■□□□□ 0.06
GPC3-201ENST00000370818 PHLPP1O60346 1717 aa15.4■□□□□ 0.06
GPC3-201ENST00000370818 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
GPC3-201ENST00000370818 HIP1O00291 1037 aa15.4■□□□□ 0.06
GPC3-201ENST00000370818 CDCA7Q9BWT1 371 aaPredicted RBP15.4■□□□□ 0.06
GPC3-201ENST00000370818 NRAPQ86VF7 1730 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms