RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PRR5LQ6MZQ0 368 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 NEURL1BA8MQ27 555 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 NTSR2O95665 410 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 SRCIN1Q9C0H9 1055 aa19.7■□□□□ 0.74
PRPF38B-202ENST00000370022 ALDH1L1O75891 902 aa19.69■□□□□ 0.74
PRPF38B-202ENST00000370022 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
PRPF38B-202ENST00000370022 CD2APQ9Y5K6 639 aa19.69■□□□□ 0.74
PRPF38B-202ENST00000370022 C10orf71Q711Q0 1435 aa19.69■□□□□ 0.74
PRPF38B-202ENST00000370022 FAM177BA6PVY3 158 aa19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 TRIM27P14373 513 aa19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 CCT4P50991 539 aaKnown RBP19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 ZBTB38Q8NAP3 1195 aaPredicted RBP19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 SH3TC1Q8TE82 1336 aa19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 AFDNP55196 1824 aaKnown RBP19.68■□□□□ 0.74
PRPF38B-202ENST00000370022 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
PRPF38B-202ENST00000370022 ABCC4O15439 1325 aa19.67■□□□□ 0.74
PRPF38B-202ENST00000370022 PCCAP05165 728 aaPredicted RBP19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 MS4A1P11836 297 aa19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 GCKRQ14397 625 aa19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 RIC1Q4ADV7 1423 aa19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 PDZRN3Q9UPQ7 1066 aa19.66■□□□□ 0.74
PRPF38B-202ENST00000370022 PDE6BP35913 854 aa19.65■□□□□ 0.74
PRPF38B-202ENST00000370022 TGFB2P61812 414 aa19.65■□□□□ 0.74
PRPF38B-202ENST00000370022 ERFEQ4G0M1 354 aa19.65■□□□□ 0.74
PRPF38B-202ENST00000370022 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
PRPF38B-202ENST00000370022 NUTM1Q86Y26 1132 aa19.65■□□□□ 0.74
PRPF38B-202ENST00000370022 INTS3Q68E01 1043 aaKnown RBP19.64■□□□□ 0.73
PRPF38B-202ENST00000370022 FTSJ3Q8IY81 847 aaKnown RBP19.64■□□□□ 0.73
PRPF38B-202ENST00000370022 FAM89AQ96GI7 184 aa19.64■□□□□ 0.73
PRPF38B-202ENST00000370022 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
PRPF38B-202ENST00000370022 KIF13BQ9NQT8 1826 aa19.64■□□□□ 0.73
PRPF38B-202ENST00000370022 H7C1W4 665 aa19.63■□□□□ 0.73
PRPF38B-202ENST00000370022 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
PRPF38B-202ENST00000370022 CDHR2Q9BYE9 1310 aa19.63■□□□□ 0.73
PRPF38B-202ENST00000370022 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
PRPF38B-202ENST00000370022 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
PRPF38B-202ENST00000370022 ABCC12Q96J65 1359 aa19.62■□□□□ 0.73
PRPF38B-202ENST00000370022 N4BP2Q86UW6 1770 aaPredicted RBP19.62■□□□□ 0.73
PRPF38B-202ENST00000370022 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 GRM8O00222 908 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 CLUAP1Q96AJ1 413 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 UBE3BQ7Z3V4 1068 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 CCDC24Q8N4L8 307 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 SYT17Q9BSW7 474 aa19.61■□□□□ 0.73
PRPF38B-202ENST00000370022 UTYO14607 1347 aa19.6■□□□□ 0.73
PRPF38B-202ENST00000370022 H0YIN7 160 aa19.59■□□□□ 0.73
PRPF38B-202ENST00000370022 PDE3AQ14432 1141 aa19.59■□□□□ 0.73
PRPF38B-202ENST00000370022 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
PRPF38B-202ENST00000370022 TNNQ9UQP3 1299 aa19.59■□□□□ 0.73
PRPF38B-202ENST00000370022 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 CASP7P55210 303 aa19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 CRY2Q49AN0 593 aa19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 SYNE4Q8N205 404 aa19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 TMEM57Q8N5G2 664 aa19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 HDAC5Q9UQL6 1122 aa19.58■□□□□ 0.73
PRPF38B-202ENST00000370022 ANKRD31Q8N7Z5 1873 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 PLIN1O60240 522 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 PDE8AO60658 829 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 RRP1P56182 461 aaKnown RBP19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 C2CD5Q86YS7 1000 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 PLA2G12BQ9BX93 195 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 USP44Q9H0E7 712 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 LAMB2P55268 1798 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 SRGNP10124 158 aa19.57■□□□□ 0.72
PRPF38B-202ENST00000370022 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
PRPF38B-202ENST00000370022 RLBP1P12271 317 aa19.56■□□□□ 0.72
PRPF38B-202ENST00000370022 SF3B3Q15393 1217 aaKnown RBP19.56■□□□□ 0.72
PRPF38B-202ENST00000370022 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
PRPF38B-202ENST00000370022 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
PRPF38B-202ENST00000370022 DDX60Q8IY21 1712 aaKnown RBP19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 TNRC6CQ9HCJ0 1690 aaKnown RBP19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 GNAI3P08754 354 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 NPR1P16066 1061 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 DPEP1P16444 411 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 STYK1Q6J9G0 422 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 ITPRIPQ8IWB1 547 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 NLGN2Q8NFZ4 835 aa19.55■□□□□ 0.72
PRPF38B-202ENST00000370022 UBTFL1P0CB47 393 aaPredicted RBP19.54■□□□□ 0.72
PRPF38B-202ENST00000370022 CHRNA5P30532 468 aa19.54■□□□□ 0.72
PRPF38B-202ENST00000370022 PANK1Q8TE04 598 aa19.54■□□□□ 0.72
PRPF38B-202ENST00000370022 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
PRPF38B-202ENST00000370022 KIAA1551Q9HCM1 1747 aa19.54■□□□□ 0.72
PRPF38B-202ENST00000370022 KCNA3P22001 575 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 HOXA10P31260 410 aaPredicted RBP19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 CTSWP56202 376 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 MVPQ14764 893 aaKnown RBP19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 CCDC152Q4G0S7 254 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 C3orf67Q6ZVT6 689 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 CNKSR1Q969H4 720 aa19.53■□□□□ 0.72
PRPF38B-202ENST00000370022 RBM17Q96I25 401 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms