RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 TPCN1Q9ULQ1 816 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 POGZQ7Z3K3 1410 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 ADGRL3Q9HAR2 1447 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 ZRANB2O95218 330 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHD1L-203ENST00000369259 ARHGAP29Q52LW3 1261 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 SULT6B1Q6IMI4 303 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 C11orf57Q6ZUT1 292 aaPredicted RBP19.03■□□□□ 0.64
CHD1L-203ENST00000369259 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 CRB1P82279 1406 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 GSDMDP57764 484 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 NEK11Q8NG66 645 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 EFCC1Q9HA90 598 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 MIS18AQ9NYP9 233 aa19.02■□□□□ 0.64
CHD1L-203ENST00000369259 PTH1RQ03431 593 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 TMCO3Q6UWJ1 677 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 LRRN4CLQ8ND94 238 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 RUFY2Q8WXA3 655 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 ARGLU1Q9NWB6 273 aaPredicted RBP19.01■□□□□ 0.63
CHD1L-203ENST00000369259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.01■□□□□ 0.637e-9■■□□□ 13.6
CHD1L-203ENST00000369259 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
CHD1L-203ENST00000369259 IDI1Q13907 227 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 STK31Q9BXU1 1019 aa19.01■□□□□ 0.63
CHD1L-203ENST00000369259 BECN2A8MW95 431 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 TNNT3P45378 269 aaPredicted RBP19■□□□□ 0.63
CHD1L-203ENST00000369259 STX1AQ16623 288 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 RHPN1Q8TCX5 695 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 COG3Q96JB2 828 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 POLR3GO15318 223 aaPredicted RBP19■□□□□ 0.63
CHD1L-203ENST00000369259 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 RASSF4Q9H2L5 321 aa19■□□□□ 0.63
CHD1L-203ENST00000369259 SURF6O75683 361 aaKnown RBP18.99■□□□□ 0.63
CHD1L-203ENST00000369259 TUBB4AP04350 444 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 FLIIQ13045 1269 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 CHD1O14646 1710 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
CHD1L-203ENST00000369259 E4F1Q66K89 784 aaPredicted RBP18.99■□□□□ 0.63
CHD1L-203ENST00000369259 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
CHD1L-203ENST00000369259 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 PPP1R13BQ96KQ4 1090 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 TSPYL4Q9UJ04 414 aa18.99■□□□□ 0.63
CHD1L-203ENST00000369259 DDX54Q8TDD1 881 aaKnown RBP18.98■□□□□ 0.63
CHD1L-203ENST00000369259 OSBPL5Q9H0X9 879 aaPredicted RBP18.98■□□□□ 0.63
CHD1L-203ENST00000369259 CTAGE5O15320 804 aa18.98■□□□□ 0.63
CHD1L-203ENST00000369259 ATP8B1O43520 1251 aa18.98■□□□□ 0.63
CHD1L-203ENST00000369259 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
CHD1L-203ENST00000369259 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
CHD1L-203ENST00000369259 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
CHD1L-203ENST00000369259 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
CHD1L-203ENST00000369259 ORC3Q9UBD5 711 aaPredicted RBP18.98■□□□□ 0.63
CHD1L-203ENST00000369259 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
CHD1L-203ENST00000369259 GPS2Q13227 327 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 DHX40Q8IX18 779 aaKnown RBP18.97■□□□□ 0.63
CHD1L-203ENST00000369259 UBXN4Q92575 508 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 UBXN6Q9BZV1 441 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 IMPACTQ9P2X3 320 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 RSPH14Q9UHP6 348 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 EIF4A2Q14240 407 aaKnown RBP18.97■□□□□ 0.63
CHD1L-203ENST00000369259 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
CHD1L-203ENST00000369259 CERS3Q8IU89 383 aa18.96■□□□□ 0.63
CHD1L-203ENST00000369259 ST5P78524 1137 aa18.96■□□□□ 0.63
CHD1L-203ENST00000369259 POLA2Q14181 598 aa18.96■□□□□ 0.63
CHD1L-203ENST00000369259 PSMA5P28066 241 aa18.95■□□□□ 0.62
CHD1L-203ENST00000369259 ANKRD1Q15327 319 aa18.95■□□□□ 0.62
CHD1L-203ENST00000369259 PPP1R42Q7Z4L9 355 aa18.95■□□□□ 0.62
CHD1L-203ENST00000369259 KCNJ6P48051 423 aa18.95■□□□□ 0.62
CHD1L-203ENST00000369259 ANO10Q9NW15 660 aa18.95■□□□□ 0.62
CHD1L-203ENST00000369259 MAP3K5Q99683 1374 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
CHD1L-203ENST00000369259 ZSCAN26Q16670 478 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 CREB3L3Q68CJ9 461 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 NBPF11Q86T75 865 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 CCDC150Q8NCX0 1101 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
CHD1L-203ENST00000369259 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
CHD1L-203ENST00000369259 ADCY9O60503 1353 aa18.94■□□□□ 0.62
CHD1L-203ENST00000369259 MYO1CO00159 1063 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 CWC15Q9P013 229 aaKnown RBP18.93■□□□□ 0.62
CHD1L-203ENST00000369259 TTC41PQ6P2S7 1318 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 TPM1P09493 284 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 CCDC191Q8NCU4 936 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 CFAP45Q9UL16 551 aa18.93■□□□□ 0.62
CHD1L-203ENST00000369259 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
CHD1L-203ENST00000369259 OAS2P29728 719 aaKnown RBP18.92■□□□□ 0.62
CHD1L-203ENST00000369259 NOP2P46087 812 aaKnown RBP18.92■□□□□ 0.62
CHD1L-203ENST00000369259 RESTQ13127 1097 aa18.92■□□□□ 0.62
CHD1L-203ENST00000369259 GORABQ5T7V8 394 aa18.92■□□□□ 0.62
CHD1L-203ENST00000369259 SRRTQ9BXP5 876 aaKnown RBP18.92■□□□□ 0.62
CHD1L-203ENST00000369259 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
CHD1L-203ENST00000369259 CEP57L1Q8IYX8 460 aa18.92■□□□□ 0.62
CHD1L-203ENST00000369259 PHLPP2Q6ZVD8 1323 aa18.92■□□□□ 0.62
CHD1L-203ENST00000369259 SEC31AO94979 1220 aaKnown RBP18.91■□□□□ 0.62
CHD1L-203ENST00000369259 ETF1P62495 437 aaKnown RBP18.91■□□□□ 0.62
CHD1L-203ENST00000369259 C10orf67Q8IYJ2 551 aa18.91■□□□□ 0.62
CHD1L-203ENST00000369259 AOPEPQ8N6M6 819 aa18.91■□□□□ 0.62
CHD1L-203ENST00000369259 MNS1Q8NEH6 495 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms