RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 RFX5P48382 616 aaPredicted RBP11.16□□□□□ -0.62
VPS45-201ENST00000369128 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
VPS45-201ENST00000369128 FOXO4P98177 505 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
VPS45-201ENST00000369128 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 SEPT12Q8IYM1 358 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 ARXQ96QS3 562 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
VPS45-201ENST00000369128 NUTM1Q86Y26 1132 aa11.15□□□□□ -0.62
VPS45-201ENST00000369128 KIF1BPQ96EK5 621 aa11.15□□□□□ -0.62
VPS45-201ENST00000369128 SIL1Q9H173 461 aa11.15□□□□□ -0.62
VPS45-201ENST00000369128 SASH1O94885 1247 aa11.15□□□□□ -0.63
VPS45-201ENST00000369128 SDSP20132 328 aa11.15□□□□□ -0.63
VPS45-201ENST00000369128 GPTP24298 496 aa11.15□□□□□ -0.63
VPS45-201ENST00000369128 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.63
VPS45-201ENST00000369128 DZIP3Q86Y13 1208 aaKnown RBP11.15□□□□□ -0.63
VPS45-201ENST00000369128 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.63
VPS45-201ENST00000369128 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.63
VPS45-201ENST00000369128 TRIM28Q13263 835 aaKnown RBP11.14□□□□□ -0.63
VPS45-201ENST00000369128 LMBR1LQ6UX01 489 aa11.14□□□□□ -0.63
VPS45-201ENST00000369128 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
VPS45-201ENST00000369128 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
VPS45-201ENST00000369128 UBN2Q6ZU65 1347 aa11.14□□□□□ -0.63
VPS45-201ENST00000369128 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
VPS45-201ENST00000369128 PTPN12Q05209 780 aaKnown RBP11.13□□□□□ -0.63
VPS45-201ENST00000369128 OS9Q13438 667 aaPredicted RBP11.13□□□□□ -0.63
VPS45-201ENST00000369128 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 IPO9Q96P70 1041 aaKnown RBP11.13□□□□□ -0.63
VPS45-201ENST00000369128 STAP2Q9UGK3 403 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 NLRP10Q86W26 655 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 FAM89AQ96GI7 184 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
VPS45-201ENST00000369128 CDC45O75419 566 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 SMIM5Q71RC9 77 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 COPRSQ9NQ92 184 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
VPS45-201ENST00000369128 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 ERVV-1B6SEH8 477 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 CAMTA2O94983 1202 aa11.12□□□□□ -0.63
VPS45-201ENST00000369128 PCCAP05165 728 aaPredicted RBP11.11□□□□□ -0.63
VPS45-201ENST00000369128 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
VPS45-201ENST00000369128 LAMB2P55268 1798 aa11.11□□□□□ -0.63
VPS45-201ENST00000369128 AOX1Q06278 1338 aa11.11□□□□□ -0.63
VPS45-201ENST00000369128 AMIGO3Q86WK7 504 aa11.11□□□□□ -0.63
VPS45-201ENST00000369128 ERC1Q8IUD2 1116 aa11.11□□□□□ -0.63
VPS45-201ENST00000369128 ZBTB38Q8NAP3 1195 aaPredicted RBP11.11□□□□□ -0.63
VPS45-201ENST00000369128 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
VPS45-201ENST00000369128 USP42Q9H9J4 1324 aaKnown RBP11.11□□□□□ -0.63
VPS45-201ENST00000369128 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
VPS45-201ENST00000369128 CNTNAP4Q9C0A0 1308 aa11.1□□□□□ -0.63
VPS45-201ENST00000369128 G3BP1Q13283 466 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS45-201ENST00000369128 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
VPS45-201ENST00000369128 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
VPS45-201ENST00000369128 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
VPS45-201ENST00000369128 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 AACSQ86V21 672 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
VPS45-201ENST00000369128 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
VPS45-201ENST00000369128 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
VPS45-201ENST00000369128 CDHR2Q9BYE9 1310 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
VPS45-201ENST00000369128 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
VPS45-201ENST00000369128 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
VPS45-201ENST00000369128 TFCP2Q12800 502 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 CCDC8Q9H0W5 538 aaPredicted RBP11.08□□□□□ -0.64
VPS45-201ENST00000369128 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 LRP5O75197 1615 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 TRMT112Q9UI30 125 aaKnown RBP11.08□□□□□ -0.64
VPS45-201ENST00000369128 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
VPS45-201ENST00000369128 COL4A1P02462 1669 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 TTC41PQ6P2S7 1318 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 SOCS7O14512 581 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 CSF1RP07333 972 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 SUSD4Q5VX71 490 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 PUS3Q9BZE2 481 aaKnown RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 IL25Q9H293 177 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 IRS4O14654 1257 aaPredicted RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 RBM25P49756 843 aaKnown RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 LRRC4BQ9NT99 713 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 ECHDC1Q9NTX5 307 aa11.07□□□□□ -0.64
VPS45-201ENST00000369128 DBNLQ9UJU6 430 aaKnown RBP11.07□□□□□ -0.64
VPS45-201ENST00000369128 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
VPS45-201ENST00000369128 CTSWP56202 376 aa11.06□□□□□ -0.64
VPS45-201ENST00000369128 TNNI3KQ59H18 835 aa11.06□□□□□ -0.64
VPS45-201ENST00000369128 TTLL11Q8NHH1 800 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms