RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TTLL7Q6ZT98 887 aa15.02■□□□□ -0
USF1-203ENST00000368021 SKAP1Q86WV1 359 aa15.02■□□□□ -0
USF1-203ENST00000368021 ARHGEF1Q92888 912 aaKnown RBP15.02■□□□□ -0
USF1-203ENST00000368021 MYD88Q99836 296 aa15.02■□□□□ -0
USF1-203ENST00000368021 TUBGCP6Q96RT7 1819 aa15.02□□□□□ -0.01
USF1-203ENST00000368021 RPS6KA4O75676 772 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 IL6STP40189 918 aaPredicted RBP15.01□□□□□ -0.01
USF1-203ENST00000368021 GCKRQ14397 625 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 FLAD1Q8NFF5 587 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 RFC4P35249 363 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 RGS3P49796 1198 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 ARXQ96QS3 562 aa15.01□□□□□ -0.01
USF1-203ENST00000368021 CASZ1Q86V15 1759 aa15□□□□□ -0.01
USF1-203ENST00000368021 MTX1Q13505 466 aa15□□□□□ -0.01
USF1-203ENST00000368021 KIF6Q6ZMV9 814 aa15□□□□□ -0.01
USF1-203ENST00000368021 CHD1LQ86WJ1 897 aa15□□□□□ -0.01
USF1-203ENST00000368021 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
USF1-203ENST00000368021 AFDNP55196 1824 aaKnown RBP15□□□□□ -0.01
USF1-203ENST00000368021 COL15A1P39059 1388 aa15□□□□□ -0.01
USF1-203ENST00000368021 COL5A3P25940 1745 aaPredicted RBP15□□□□□ -0.01
USF1-203ENST00000368021 UBR3Q6ZT12 1888 aa14.99□□□□□ -0.01
USF1-203ENST00000368021 PTGER2P43116 358 aa14.99□□□□□ -0.01
USF1-203ENST00000368021 SSH3Q8TE77 659 aa14.99□□□□□ -0.01
USF1-203ENST00000368021 SLC16A10Q8TF71 515 aa14.99□□□□□ -0.01
USF1-203ENST00000368021 SRP68Q9UHB9 627 aaKnown RBP14.99□□□□□ -0.01
USF1-203ENST00000368021 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
USF1-203ENST00000368021 TRIM28Q13263 835 aaKnown RBP14.98□□□□□ -0.01
USF1-203ENST00000368021 POLA2Q14181 598 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 CCDC191Q8NCU4 936 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
USF1-203ENST00000368021 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
USF1-203ENST00000368021 ERVV-1B6SEH8 477 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 ADRA2BP18089 450 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 TCIRG1Q13488 830 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 CWC25Q9NXE8 425 aaPredicted RBP14.96□□□□□ -0.01
USF1-203ENST00000368021 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 PDE4AP27815 886 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 POLD1P28340 1107 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
USF1-203ENST00000368021 GIGYF2Q6Y7W6 1299 aaKnown RBP14.96□□□□□ -0.01
USF1-203ENST00000368021 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 LNPKQ9C0E8 428 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 TBC1D2BQ9UPU7 963 aa14.96□□□□□ -0.01
USF1-203ENST00000368021 SRGAP3O43295 1099 aa14.95□□□□□ -0.02
USF1-203ENST00000368021 ZPR1O75312 459 aa14.95□□□□□ -0.02
USF1-203ENST00000368021 KAZALD1Q96I82 304 aa14.95□□□□□ -0.02
USF1-203ENST00000368021 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
USF1-203ENST00000368021 QSER1Q2KHR3 1735 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 A0A087WZG4 1122 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 H7C1W4 665 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 GYS1P13807 737 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 CASP7P55210 303 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 USPL1Q5W0Q7 1092 aa14.94□□□□□ -0.02
USF1-203ENST00000368021 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
USF1-203ENST00000368021 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
USF1-203ENST00000368021 BICC1Q9H694 974 aaKnown RBP14.94□□□□□ -0.02
USF1-203ENST00000368021 ANKRD36CQ5JPF3 1778 aa14.93□□□□□ -0.02
USF1-203ENST00000368021 USP42Q9H9J4 1324 aaKnown RBP14.93□□□□□ -0.02
USF1-203ENST00000368021 UBE3BQ7Z3V4 1068 aa14.93□□□□□ -0.02
USF1-203ENST00000368021 NUP98P52948 1817 aa14.93□□□□□ -0.02
USF1-203ENST00000368021 RAB11FIP3O75154 756 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
USF1-203ENST00000368021 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 BACH2Q9BYV9 841 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 EXOC6BQ9Y2D4 811 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
USF1-203ENST00000368021 RGL2O15211 777 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 MMP10P09238 476 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 NLGN1Q8N2Q7 840 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 PKNOX2Q96KN3 472 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 LRRCC1Q9C099 1032 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 FHDC1Q9C0D6 1143 aaPredicted RBP14.92□□□□□ -0.02
USF1-203ENST00000368021 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
USF1-203ENST00000368021 HLFQ16534 295 aa14.91□□□□□ -0.02
USF1-203ENST00000368021 BICDL1Q6ZP65 573 aa14.91□□□□□ -0.02
USF1-203ENST00000368021 LRP5O75197 1615 aa14.9□□□□□ -0.02
USF1-203ENST00000368021 SURF6O75683 361 aaKnown RBP14.9□□□□□ -0.02
USF1-203ENST00000368021 PCCAP05165 728 aaPredicted RBP14.89□□□□□ -0.03
USF1-203ENST00000368021 C8orf34Q49A92 452 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 EPHA10Q5JZY3 1008 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
USF1-203ENST00000368021 C4AP0C0L4 1744 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 CAMTA2O94983 1202 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 NLRP10Q86W26 655 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 ZNF34Q8IZ26 560 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 KIF1BPQ96EK5 621 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 BCL2L12Q9HB09 334 aa14.89□□□□□ -0.03
USF1-203ENST00000368021 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 BMP2KLQ5H9B9 411 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 CLEC4GQ6UXB4 293 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 PLEKHM2Q8IWE5 1019 aa14.88□□□□□ -0.03
USF1-203ENST00000368021 SYT17Q9BSW7 474 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms