RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 IARSP41252 1262 aaKnown RBP19.35■□□□□ 0.69
CTSD-202ENST00000367196 PDIA6Q15084 440 aa19.35■□□□□ 0.69
CTSD-202ENST00000367196 L3MBTL3Q96JM7 780 aaPredicted RBP19.35■□□□□ 0.69
CTSD-202ENST00000367196 UTP14AQ9BVJ6 771 aaKnown RBP19.35■□□□□ 0.69
CTSD-202ENST00000367196 ZNF277Q9NRM2 450 aaPredicted RBP19.35■□□□□ 0.69
CTSD-202ENST00000367196 CHL1O00533 1208 aa19.34■□□□□ 0.69
CTSD-202ENST00000367196 LRP10Q7Z4F1 713 aa19.34■□□□□ 0.69
CTSD-202ENST00000367196 JDP2Q8WYK2 163 aa19.34■□□□□ 0.69
CTSD-202ENST00000367196 NLRP3Q96P20 1036 aa19.34■□□□□ 0.69
CTSD-202ENST00000367196 CRAMP1Q96RY5 1269 aa19.34■□□□□ 0.69
CTSD-202ENST00000367196 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
CTSD-202ENST00000367196 DDX21Q9NR30 783 aaKnown RBP eCLIP19.34■□□□□ 0.69
CTSD-202ENST00000367196 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
CTSD-202ENST00000367196 SYNE4Q8N205 404 aa19.33■□□□□ 0.68
CTSD-202ENST00000367196 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
CTSD-202ENST00000367196 PPEF1O14829 653 aaPredicted RBP19.32■□□□□ 0.68
CTSD-202ENST00000367196 PROSER3Q2NL68 480 aa19.32■□□□□ 0.68
CTSD-202ENST00000367196 CHADLQ6NUI6 762 aa19.32■□□□□ 0.68
CTSD-202ENST00000367196 TRIM35Q9UPQ4 493 aa19.32■□□□□ 0.68
CTSD-202ENST00000367196 ANXA1P04083 346 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 HTRA3P83110 453 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 CALD1Q05682 793 aaKnown RBP19.31■□□□□ 0.68
CTSD-202ENST00000367196 AIMP1Q12904 312 aaKnown RBP19.31■□□□□ 0.68
CTSD-202ENST00000367196 IFFO2Q5TF58 517 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 OLFM4Q6UX06 510 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 XAGE3Q8WTP9 111 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
CTSD-202ENST00000367196 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
CTSD-202ENST00000367196 HDGFL1Q5TGJ6 251 aa19.3■□□□□ 0.68
CTSD-202ENST00000367196 LDHDQ86WU2 507 aa19.3■□□□□ 0.68
CTSD-202ENST00000367196 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
CTSD-202ENST00000367196 CFAP44Q96MT7 982 aa19.3■□□□□ 0.68
CTSD-202ENST00000367196 ZNF541Q9H0D2 1346 aa19.29■□□□□ 0.68
CTSD-202ENST00000367196 FZD9O00144 591 aa19.29■□□□□ 0.68
CTSD-202ENST00000367196 GPC2Q8N158 579 aa19.29■□□□□ 0.68
CTSD-202ENST00000367196 DBF4Q9UBU7 674 aaPredicted RBP19.29■□□□□ 0.68
CTSD-202ENST00000367196 HACL1Q9UJ83 578 aa19.29■□□□□ 0.68
CTSD-202ENST00000367196 EIF6P56537 245 aaKnown RBP19.28■□□□□ 0.68
CTSD-202ENST00000367196 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
CTSD-202ENST00000367196 PNMA8AQ86V59 439 aaPredicted RBP19.28■□□□□ 0.68
CTSD-202ENST00000367196 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
CTSD-202ENST00000367196 TAF1DQ9H5J8 278 aaPredicted RBP19.28■□□□□ 0.68
CTSD-202ENST00000367196 CHPF2Q9P2E5 772 aa19.28■□□□□ 0.68
CTSD-202ENST00000367196 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
CTSD-202ENST00000367196 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
CTSD-202ENST00000367196 TRMT112Q9UI30 125 aaKnown RBP19.27■□□□□ 0.68
CTSD-202ENST00000367196 LAMB2P55268 1798 aa19.27■□□□□ 0.67
CTSD-202ENST00000367196 KRT24Q2M2I5 525 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 LARGE2Q8N3Y3 721 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 SUPT20HQ8NEM7 779 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 PLBD2Q8NHP8 589 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 CHMP4AQ9BY43 222 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 CREBZFQ9NS37 354 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 ATP6V0A2Q9Y487 856 aa19.26■□□□□ 0.67
CTSD-202ENST00000367196 EPHX2P34913 555 aa19.25■□□□□ 0.67
CTSD-202ENST00000367196 GNAI1P63096 354 aa19.25■□□□□ 0.67
CTSD-202ENST00000367196 EAPPQ56P03 285 aaPredicted RBP19.25■□□□□ 0.67
CTSD-202ENST00000367196 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
CTSD-202ENST00000367196 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
CTSD-202ENST00000367196 ABCC4O15439 1325 aa19.25■□□□□ 0.67
CTSD-202ENST00000367196 BBOX1O75936 387 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
CTSD-202ENST00000367196 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 ANKRD13DQ6ZTN6 518 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 C3orf67Q6ZVT6 689 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 TMC4Q7Z404 712 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 NIM1KQ8IY84 436 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
CTSD-202ENST00000367196 APAF1O14727 1248 aa19.23■□□□□ 0.67
CTSD-202ENST00000367196 TCERG1O14776 1098 aaKnown RBP19.23■□□□□ 0.67
CTSD-202ENST00000367196 POTEIP0CG38 1075 aa19.23■□□□□ 0.67
CTSD-202ENST00000367196 POTEJP0CG39 1038 aa19.23■□□□□ 0.67
CTSD-202ENST00000367196 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
CTSD-202ENST00000367196 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
CTSD-202ENST00000367196 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
CTSD-202ENST00000367196 GJA3Q9Y6H8 435 aa19.22■□□□□ 0.67
CTSD-202ENST00000367196 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 GOLGA2Q08379 1002 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 GRAPQ13588 217 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 DPP8Q6V1X1 898 aaPredicted RBP19.21■□□□□ 0.67
CTSD-202ENST00000367196 SP8Q8IXZ3 490 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 GRAPLQ8TC17 118 aaPredicted RBP19.21■□□□□ 0.67
CTSD-202ENST00000367196 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
CTSD-202ENST00000367196 HSP90B1P14625 803 aaKnown RBP19.2■□□□□ 0.66
CTSD-202ENST00000367196 COL4A5P29400 1685 aa19.2■□□□□ 0.66
CTSD-202ENST00000367196 DDX60Q8IY21 1712 aaKnown RBP19.2■□□□□ 0.66
CTSD-202ENST00000367196 MPNDQ8N594 471 aa19.19■□□□□ 0.66
CTSD-202ENST00000367196 ISCA1Q9BUE6 129 aa19.19■□□□□ 0.66
CTSD-202ENST00000367196 RTFDC1Q9BY42 306 aaPredicted RBP19.19■□□□□ 0.66
CTSD-202ENST00000367196 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
CTSD-202ENST00000367196 AOC3Q16853 763 aa19.18■□□□□ 0.66
CTSD-202ENST00000367196 RIC3Q7Z5B4 369 aa19.18■□□□□ 0.66
CTSD-202ENST00000367196 LRRC37AA6NMS7 1700 aa19.17■□□□□ 0.66
CTSD-202ENST00000367196 TMEM88BA6NKF7 163 aa19.17■□□□□ 0.66
CTSD-202ENST00000367196 TRIM28Q13263 835 aaKnown RBP19.17■□□□□ 0.66
CTSD-202ENST00000367196 PCNTO95613 3336 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms