RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 PSMD1Q99460 953 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 BABAM1Q9NWV8 329 aa10.72□□□□□ -0.69
RNU4-59P-201ENST00000364447 NTSR2O95665 410 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 EAPPQ56P03 285 aaPredicted RBP10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 LDHDQ86WU2 507 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 RBM17Q96I25 401 aaKnown RBP10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 TAF1DQ9H5J8 278 aaPredicted RBP10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 HACL1Q9UJ83 578 aa10.71□□□□□ -0.69
RNU4-59P-201ENST00000364447 LAMB2P55268 1798 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 PPEF1O14829 653 aaPredicted RBP10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 ANXA1P04083 346 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 PDIA6Q15084 440 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 CRAMP1Q96RY5 1269 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
RNU4-59P-201ENST00000364447 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 FZD9O00144 591 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 EPHX2P34913 555 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 AIMP1Q12904 312 aaKnown RBP10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 PROSER3Q2NL68 480 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 PNMA8AQ86V59 439 aaPredicted RBP10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 GPC2Q8N158 579 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 RUNDC1Q96C34 613 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 UTP14AQ9BVJ6 771 aaKnown RBP10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 ADAMTSL1Q8N6G6 1762 aa10.69□□□□□ -0.7
RNU4-59P-201ENST00000364447 HSPA1AP0DMV8 641 aaKnown RBP10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 HSPA1BP0DMV9 641 aaKnown RBP10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 C3orf67Q6ZVT6 689 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 LRP10Q7Z4F1 713 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 LARGE2Q8N3Y3 721 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 XAGE3Q8WTP9 111 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 MKRN1Q9UHC7 482 aaKnown RBP10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 GJA3Q9Y6H8 435 aa10.68□□□□□ -0.7
RNU4-59P-201ENST00000364447 COL4A5P29400 1685 aa10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 CHL1O00533 1208 aa10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 LMOD1P29536 600 aaPredicted RBP10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 COL13A1Q5TAT6 717 aaPredicted RBP10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 NIM1KQ8IY84 436 aa10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
RNU4-59P-201ENST00000364447 PASKQ96RG2 1323 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 PPIP5K2O43314 1243 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 KRT24Q2M2I5 525 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 HDGFL1Q5TGJ6 251 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 TNS4Q8IZW8 715 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 CHPF2Q9P2E5 772 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 TRMT112Q9UI30 125 aaKnown RBP10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 ATP6V0A2Q9Y487 856 aa10.66□□□□□ -0.7
RNU4-59P-201ENST00000364447 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 ABCC4O15439 1325 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 LTBP1Q14766 1721 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 DDX60Q8IY21 1712 aaKnown RBP10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 TMEM88BA6NKF7 163 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 HOXB7P09629 217 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 HCLS1P14317 486 aaPredicted RBP10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 AOC3Q16853 763 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 MAP1SQ66K74 1059 aaPredicted RBP10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 DDX46Q7L014 1031 aaKnown RBP10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 SLC51AQ86UW1 340 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 TAF1P21675 1872 aa10.65□□□□□ -0.7
RNU4-59P-201ENST00000364447 BBOX1O75936 387 aa10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 CNTROBQ8N137 903 aa10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 VPS33BQ9H267 617 aa10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 DBF4Q9UBU7 674 aaPredicted RBP10.64□□□□□ -0.71
RNU4-59P-201ENST00000364447 MPNDQ8N594 471 aa10.63□□□□□ -0.71
RNU4-59P-201ENST00000364447 PLBD2Q8NHP8 589 aa10.63□□□□□ -0.71
RNU4-59P-201ENST00000364447 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
RNU4-59P-201ENST00000364447 LRRC37AA6NMS7 1700 aa10.63□□□□□ -0.71
RNU4-59P-201ENST00000364447 TRPM7Q96QT4 1865 aa10.63□□□□□ -0.71
RNU4-59P-201ENST00000364447 CAPN15O75808 1086 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 EPS15P42566 896 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 SCNN1DP51172 638 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 GRAPQ13588 217 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
RNU4-59P-201ENST00000364447 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms