RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 COX20Q5RI15 118 aa8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 FCHSD1Q86WN1 690 aa8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 DMGDHQ9UI17 866 aaKnown RBP8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 KLF15Q9UIH9 416 aa8.13□□□□□ -1.11
RNU6-553P-201ENST00000364047 RNF225M0QZC1 329 aaPredicted RBP8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 PTCD1O75127 700 aaKnown RBP8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 EPXP11678 715 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 AMPD1P23109 780 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 C16orf46Q6P387 395 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 IFT43Q96FT9 208 aa8.12□□□□□ -1.11
RNU6-553P-201ENST00000364047 TMEM88BA6NKF7 163 aa8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 MICAL2O94851 1124 aa8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 EPB42P16452 691 aa8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 SCARF2Q96GP6 870 aaPredicted RBP8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 SAP130Q9H0E3 1048 aa8.11□□□□□ -1.11
RNU6-553P-201ENST00000364047 SIN3BO75182 1162 aa8.1□□□□□ -1.11
RNU6-553P-201ENST00000364047 INPP5BP32019 993 aa8.1□□□□□ -1.11
RNU6-553P-201ENST00000364047 ARSDP51689 593 aa8.1□□□□□ -1.11
RNU6-553P-201ENST00000364047 PODNQ7Z5L7 613 aa8.1□□□□□ -1.11
RNU6-553P-201ENST00000364047 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
RNU6-553P-201ENST00000364047 TREML1Q86YW5 311 aa8.09□□□□□ -1.11
RNU6-553P-201ENST00000364047 BHMTQ93088 406 aa8.09□□□□□ -1.11
RNU6-553P-201ENST00000364047 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
RNU6-553P-201ENST00000364047 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 GRNP28799 593 aaKnown RBP8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 IRS1P35568 1242 aa8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 SNRPNP63162 240 aaKnown RBP8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
RNU6-553P-201ENST00000364047 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 BRD2P25440 801 aaKnown RBP8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 CCINQ13939 588 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 CHSY3Q70JA7 882 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 ELOA3Q8NG57 546 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 PNMA5Q96PV4 448 aa8.07□□□□□ -1.12
RNU6-553P-201ENST00000364047 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 OPLAHO14841 1288 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 ALAS2P22557 587 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 RGL4Q8IZJ4 473 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 TNFRSF25Q93038 417 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 GSX2Q9BZM3 304 aa8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 RTCBQ9Y3I0 505 aaKnown RBP8.06□□□□□ -1.12
RNU6-553P-201ENST00000364047 ADARB2-AS1A8MUL3 147 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 NFKB1P19838 968 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 SSFA2P28290 1259 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 SCNN1AP37088 669 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 RASSF7Q02833 373 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 TBC1D8BQ0IIM8 1120 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 IGFLR1Q9H665 355 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 EFCC1Q9HA90 598 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 MKL2Q9ULH7 1088 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 USTQ9Y2C2 406 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 USP20Q9Y2K6 914 aa8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.05□□□□□ -1.12
RNU6-553P-201ENST00000364047 ADH7P40394 386 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 GSK3AP49840 483 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 FAM26DQ5JW98 314 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 KANK3Q6NY19 840 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 MDFIQ99750 246 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 UBE2OQ9C0C9 1292 aaKnown RBP8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 STIM2Q9P246 746 aa8.04□□□□□ -1.12
RNU6-553P-201ENST00000364047 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
RNU6-553P-201ENST00000364047 DGKGP49619 791 aa8.03□□□□□ -1.12
RNU6-553P-201ENST00000364047 KRT25Q7Z3Z0 450 aa8.03□□□□□ -1.12
RNU6-553P-201ENST00000364047 CMTR1Q8N1G2 835 aaKnown RBP8.03□□□□□ -1.12
RNU6-553P-201ENST00000364047 ABTB2Q8N961 1025 aa8.02□□□□□ -1.13
RNU6-553P-201ENST00000364047 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
RNU6-553P-201ENST00000364047 XYLBO75191 536 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 SASH3O75995 380 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 GDF11O95390 407 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 ZAP70P43403 619 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 LINC00114Q6XXX2 140 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 TMEM151AQ8N4L1 468 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 DNAJB12Q9NXW2 375 aaKnown RBP8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 ZFATQ9P243 1243 aa8.01□□□□□ -1.13
RNU6-553P-201ENST00000364047 PIK3R2O00459 728 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 GNB5O14775 395 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 ZBTB39O15060 712 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 RARAP10276 462 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 TARSP26639 723 aaKnown RBP8□□□□□ -1.13
RNU6-553P-201ENST00000364047 PHLDB3Q6NSJ2 640 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 RETREG2Q8NC44 543 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 SLC6A14Q9UN76 642 aa8□□□□□ -1.13
RNU6-553P-201ENST00000364047 KCNMB2Q9Y691 235 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms