RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 GPBP1L1Q9HC44 474 aaPredicted RBP25.98■■□□□ 1.75
SHISA4-201ENST00000362011 IBTKQ9P2D0 1353 aaPredicted RBP25.97■■□□□ 1.75
SHISA4-201ENST00000362011 GIGYF2Q6Y7W6 1299 aaKnown RBP25.97■■□□□ 1.75
SHISA4-201ENST00000362011 HSP90AB3PQ58FF7 597 aa25.96■■□□□ 1.75
SHISA4-201ENST00000362011 ZBTB40Q9NUA8 1239 aa25.96■■□□□ 1.75
SHISA4-201ENST00000362011 MYH3P11055 1940 aa25.95■■□□□ 1.75
SHISA4-201ENST00000362011 NEURL1BA8MQ27 555 aa25.95■■□□□ 1.75
SHISA4-201ENST00000362011 IGKV5-2P06315 115 aa25.95■■□□□ 1.75
SHISA4-201ENST00000362011 CWF19L2Q2TBE0 894 aaKnown RBP25.95■■□□□ 1.75
SHISA4-201ENST00000362011 KIF13BQ9NQT8 1826 aa25.94■■□□□ 1.74
SHISA4-201ENST00000362011 TCIRG1Q13488 830 aa25.94■■□□□ 1.74
SHISA4-201ENST00000362011 MEIS3Q99687 375 aa25.94■■□□□ 1.74
SHISA4-201ENST00000362011 CAMTA2O94983 1202 aa25.93■■□□□ 1.74
SHISA4-201ENST00000362011 GNAI3P08754 354 aa25.93■■□□□ 1.74
SHISA4-201ENST00000362011 ADRA2BP18089 450 aa25.93■■□□□ 1.74
SHISA4-201ENST00000362011 HLFQ16534 295 aa25.93■■□□□ 1.74
SHISA4-201ENST00000362011 KIAA1551Q9HCM1 1747 aa25.92■■□□□ 1.74
SHISA4-201ENST00000362011 ATP5J2-PTCD1G3V325 749 aa25.92■■□□□ 1.74
SHISA4-201ENST00000362011 ISCA1Q9BUE6 129 aa25.92■■□□□ 1.74
SHISA4-201ENST00000362011 RGL2O15211 777 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 TRAPPC3LQ5T215 181 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 USP44Q9H0E7 712 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 ZNF652Q9Y2D9 606 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 LAMB2P55268 1798 aa25.91■■□□□ 1.74
SHISA4-201ENST00000362011 MMP10P09238 476 aa25.9■■□□□ 1.74
SHISA4-201ENST00000362011 GCKRQ14397 625 aa25.9■■□□□ 1.74
SHISA4-201ENST00000362011 CCDC191Q8NCU4 936 aa25.9■■□□□ 1.74
SHISA4-201ENST00000362011 ARHGEF1Q92888 912 aaKnown RBP25.9■■□□□ 1.74
SHISA4-201ENST00000362011 CCDC136Q96JN2 1154 aa25.9■■□□□ 1.74
SHISA4-201ENST00000362011 CWC25Q9NXE8 425 aaPredicted RBP25.9■■□□□ 1.74
SHISA4-201ENST00000362011 C9orf78Q9NZ63 289 aaPredicted RBP25.9■■□□□ 1.74
SHISA4-201ENST00000362011 UBTFL1P0CB47 393 aaPredicted RBP25.89■■□□□ 1.74
SHISA4-201ENST00000362011 HSPA6P17066 643 aa25.89■■□□□ 1.74
SHISA4-201ENST00000362011 IFFO2Q5TF58 517 aa25.89■■□□□ 1.74
SHISA4-201ENST00000362011 GRM8O00222 908 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 ZPR1O75312 459 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 RFC4P35249 363 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 TRIM28Q13263 835 aaKnown RBP25.88■■□□□ 1.73
SHISA4-201ENST00000362011 UTYO14607 1347 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 KIF3CO14782 793 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 GNAI2P04899 355 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 TGFB2P61812 414 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 CLEC4GQ6UXB4 293 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 C1orf115Q9H7X2 142 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 WWC3Q9ULE0 1092 aa25.88■■□□□ 1.73
SHISA4-201ENST00000362011 USP42Q9H9J4 1324 aaKnown RBP25.87■■□□□ 1.73
SHISA4-201ENST00000362011 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
SHISA4-201ENST00000362011 B4GALNT3Q6L9W6 998 aa25.87■■□□□ 1.73
SHISA4-201ENST00000362011 NLGN1Q8N2Q7 840 aa25.87■■□□□ 1.73
SHISA4-201ENST00000362011 ZNF526Q8TF50 670 aaPredicted RBP25.87■■□□□ 1.73
SHISA4-201ENST00000362011 HDAC5Q9UQL6 1122 aa25.87■■□□□ 1.73
SHISA4-201ENST00000362011 PCDHB15Q9Y5E8 787 aa25.87■■□□□ 1.73
SHISA4-201ENST00000362011 C10orf71Q711Q0 1435 aa25.86■■□□□ 1.73
SHISA4-201ENST00000362011 NBPF7P0C2Y1 421 aaPredicted RBP25.86■■□□□ 1.73
SHISA4-201ENST00000362011 GPTP24298 496 aa25.86■■□□□ 1.73
SHISA4-201ENST00000362011 ZNF34Q8IZ26 560 aa25.86■■□□□ 1.73
SHISA4-201ENST00000362011 SRP68Q9UHB9 627 aaKnown RBP25.86■■□□□ 1.73
SHISA4-201ENST00000362011 DDX60Q8IY21 1712 aaKnown RBP25.85■■□□□ 1.73
SHISA4-201ENST00000362011 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
SHISA4-201ENST00000362011 GYS1P13807 737 aa25.83■■□□□ 1.73
SHISA4-201ENST00000362011 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
SHISA4-201ENST00000362011 LRRFIP2Q9Y608 721 aaKnown RBP25.83■■□□□ 1.73
SHISA4-201ENST00000362011 PARP10Q53GL7 1025 aa25.82■■□□□ 1.72
SHISA4-201ENST00000362011 NIP7Q9Y221 180 aaKnown RBP eCLIP25.82■■□□□ 1.72
SHISA4-201ENST00000362011 UBN2Q6ZU65 1347 aa25.82■■□□□ 1.72
SHISA4-201ENST00000362011 H7C1W4 665 aa25.81■■□□□ 1.72
SHISA4-201ENST00000362011 UBE3BQ7Z3V4 1068 aa25.81■■□□□ 1.72
SHISA4-201ENST00000362011 PCCAP05165 728 aaPredicted RBP25.8■■□□□ 1.72
SHISA4-201ENST00000362011 CEP85Q6P2H3 762 aa25.8■■□□□ 1.72
SHISA4-201ENST00000362011 RPAP2Q8IXW5 612 aaPredicted RBP25.8■■□□□ 1.72
SHISA4-201ENST00000362011 A0A0G2JLW4 131 aa25.79■■□□□ 1.72
SHISA4-201ENST00000362011 CASP7P55210 303 aa25.79■■□□□ 1.72
SHISA4-201ENST00000362011 ANKRD44Q8N8A2 993 aa25.79■■□□□ 1.72
SHISA4-201ENST00000362011 SUCLG2Q96I99 432 aa25.79■■□□□ 1.72
SHISA4-201ENST00000362011 RWDD1Q9H446 243 aaPredicted RBP25.79■■□□□ 1.72
SHISA4-201ENST00000362011 BRCA1P38398 1863 aaKnown RBP25.78■■□□□ 1.72
SHISA4-201ENST00000362011 TBC1D9BQ66K14 1250 aa25.78■■□□□ 1.72
SHISA4-201ENST00000362011 PPP1R42Q7Z4L9 355 aa25.78■■□□□ 1.72
SHISA4-201ENST00000362011 ZBTB38Q8NAP3 1195 aaPredicted RBP25.78■■□□□ 1.72
SHISA4-201ENST00000362011 KCNA3P22001 575 aa25.77■■□□□ 1.72
SHISA4-201ENST00000362011 HDAC1Q13547 482 aaPredicted RBP25.77■■□□□ 1.72
SHISA4-201ENST00000362011 JARID2Q92833 1246 aaPredicted RBP25.77■■□□□ 1.72
SHISA4-201ENST00000362011 CDHR2Q9BYE9 1310 aa25.76■■□□□ 1.71
SHISA4-201ENST00000362011 DPEP1P16444 411 aa25.76■■□□□ 1.71
SHISA4-201ENST00000362011 SUSD4Q5VX71 490 aa25.76■■□□□ 1.71
SHISA4-201ENST00000362011 TRMT112Q9UI30 125 aaKnown RBP25.76■■□□□ 1.71
SHISA4-201ENST00000362011 BCS1LQ9Y276 419 aa25.76■■□□□ 1.71
SHISA4-201ENST00000362011 ATP8B2P98198 1209 aa25.75■■□□□ 1.71
SHISA4-201ENST00000362011 RTL5Q5HYW3 569 aaPredicted RBP25.75■■□□□ 1.71
SHISA4-201ENST00000362011 BICDL1Q6ZP65 573 aa25.75■■□□□ 1.71
SHISA4-201ENST00000362011 SETDB2Q96T68 719 aa25.75■■□□□ 1.71
SHISA4-201ENST00000362011 UTP14AQ9BVJ6 771 aaKnown RBP25.75■■□□□ 1.71
SHISA4-201ENST00000362011 HMMRO75330 724 aa25.74■■□□□ 1.71
SHISA4-201ENST00000362011 IGHDP01880 384 aa25.74■■□□□ 1.71
SHISA4-201ENST00000362011 CENPQQ7L2Z9 268 aaPredicted RBP25.74■■□□□ 1.71
SHISA4-201ENST00000362011 SIRT2Q8IXJ6 389 aa25.74■■□□□ 1.71
SHISA4-201ENST00000362011 FAM89AQ96GI7 184 aa25.74■■□□□ 1.71
SHISA4-201ENST00000362011 BICC1Q9H694 974 aaKnown RBP25.74■■□□□ 1.71
SHISA4-201ENST00000362011 KDM2BQ8NHM5 1336 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms