RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 MTRF1LQ9UGC7 380 aaKnown RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 TUBBP07437 444 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 HVCN1Q96D96 273 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 A6NNZ2 444 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 MYO1BO43795 1136 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 ADCY5O95622 1261 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 TUBB8Q3ZCM7 444 aa9.59□□□□□ -0.87
NCKAP1-202ENST00000361354 NAA16Q6N069 864 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 CRCPO75575 148 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 DACT3Q96B18 629 aaPredicted RBP9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 BICDL2A1A5D9 508 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 VPS52Q8N1B4 723 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 ZEB2O60315 1214 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 MAP3K7CLP57077 242 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 TBC1D31Q96DN5 1066 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 GEN1Q17RS7 908 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 FKBP4Q02790 459 aaKnown RBP eCLIP9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 XAB2Q9HCS7 855 aaKnown RBP9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 CCT6BQ92526 530 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 BACH2Q9BYV9 841 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 LRRC27Q9C0I9 530 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 VPS18Q9P253 973 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 CACYBPQ9HB71 228 aaKnown RBP9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 NKIRAS1Q9NYS0 192 aa9.58□□□□□ -0.88
NCKAP1-202ENST00000361354 TCERG1LQ5VWI1 586 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 AIDAQ96BJ3 306 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 VAV2P52735 878 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 CWC27Q6UX04 472 aaKnown RBP9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 TMOD2Q9NZR1 351 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 AKR1B10O60218 316 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 AACSQ86V21 672 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 GAS8O95995 478 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 SETD1BQ9UPS6 1966 aaKnown RBP9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 FCHSD2O94868 740 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 HSPA1LP34931 641 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 SYCP3Q8IZU3 236 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 CUX1P39880 1505 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 TCP11L1Q9NUJ3 509 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 RNF8O76064 485 aa9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 GKAP1Q5VSY0 366 aaPredicted RBP9.57□□□□□ -0.88
NCKAP1-202ENST00000361354 CETN3O15182 167 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 ZNF354CQ86Y25 554 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 HMOX1P09601 288 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 GBP5Q96PP8 586 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 RMND1Q9NWS8 449 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 HDXQ7Z353 690 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 TSGA10Q9BZW7 698 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 LRCH2Q5VUJ6 765 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 SDCCAG8Q86SQ7 713 aaPredicted RBP9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 LMBR1Q8WVP7 490 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 ARHGAP25P42331 645 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 CLUL1Q15846 466 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 CHD1LQ86WJ1 897 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 TTC16Q8NEE8 873 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 GSDMBQ8TAX9 411 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 IRX4P78413 519 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 LRRC43Q8N309 656 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 CPLX3Q8WVH0 158 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 SIL1Q9H173 461 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 WDHD1O75717 1129 aaPredicted RBP9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 MAP2K2P36507 400 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 CCDC89Q8N998 374 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 FSIP1Q8NA03 581 aa9.56□□□□□ -0.88
NCKAP1-202ENST00000361354 PDCD7Q8N8D1 485 aaKnown RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 CCDC194A0A1B0GVG4 234 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 GOLGA8BA8MQT2 603 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 INPP1P49441 399 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 ZSCAN29Q8IWY8 852 aaPredicted RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 CKAP2LQ8IYA6 745 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 EXOC1Q9NV70 894 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 UVSSAQ2YD98 709 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 LRSAM1Q6UWE0 723 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 BAG4O95429 457 aaKnown RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 BCAP29Q9UHQ4 241 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 VIMP08670 466 aaKnown RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 UTP14AQ9BVJ6 771 aaKnown RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 KRT86O43790 486 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 LRP2BPQ9P2M1 347 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 GIPC1O14908 333 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 KCNK9Q9NPC2 374 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 MAP3K21Q5TCX8 1036 aa9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 AEBP2Q6ZN18 517 aaPredicted RBP9.55□□□□□ -0.88
NCKAP1-202ENST00000361354 ARHGEF2Q92974 986 aaKnown RBP9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 CALCOCO2Q13137 446 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 INF2Q27J81 1249 aa9.54□□□□□ -0.88
NCKAP1-202ENST00000361354 MSANTD4Q8NCY6 345 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms