RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 CC2D2BQ6DHV5 1058 aa19.85■□□□□ 0.77
GDPD3-201ENST00000360688 ZNF34Q8IZ26 560 aa19.85■□□□□ 0.77
GDPD3-201ENST00000360688 RPGRQ92834 1020 aaKnown RBP19.85■□□□□ 0.77
GDPD3-201ENST00000360688 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 COL4A5P29400 1685 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 EPHX2P34913 555 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
GDPD3-201ENST00000360688 GPC2Q8N158 579 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 CNTNAP1P78357 1384 aa19.84■□□□□ 0.77
GDPD3-201ENST00000360688 NTSR2O95665 410 aa19.83■□□□□ 0.77
GDPD3-201ENST00000360688 JDP2Q8WYK2 163 aa19.83■□□□□ 0.77
GDPD3-201ENST00000360688 CAPN15O75808 1086 aa19.82■□□□□ 0.76
GDPD3-201ENST00000360688 LRP10Q7Z4F1 713 aa19.82■□□□□ 0.76
GDPD3-201ENST00000360688 PNMA8AQ86V59 439 aaPredicted RBP19.82■□□□□ 0.76
GDPD3-201ENST00000360688 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
GDPD3-201ENST00000360688 CLEC11AQ9Y240 323 aa19.82■□□□□ 0.76
GDPD3-201ENST00000360688 TMEM88BA6NKF7 163 aa19.81■□□□□ 0.76
GDPD3-201ENST00000360688 C3orf67Q6ZVT6 689 aa19.81■□□□□ 0.76
GDPD3-201ENST00000360688 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
GDPD3-201ENST00000360688 CRAMP1Q96RY5 1269 aa19.81■□□□□ 0.76
GDPD3-201ENST00000360688 RIPK4P57078 832 aa19.8■□□□□ 0.76
GDPD3-201ENST00000360688 PDIA6Q15084 440 aa19.8■□□□□ 0.76
GDPD3-201ENST00000360688 GRIPAP1Q4V328 841 aa19.8■□□□□ 0.76
GDPD3-201ENST00000360688 RBM17Q96I25 401 aaKnown RBP19.8■□□□□ 0.76
GDPD3-201ENST00000360688 PPEF1O14829 653 aaPredicted RBP19.79■□□□□ 0.76
GDPD3-201ENST00000360688 EIF2S2P20042 333 aaKnown RBP19.79■□□□□ 0.76
GDPD3-201ENST00000360688 LTBP1Q14766 1721 aa19.79■□□□□ 0.76
GDPD3-201ENST00000360688 PARP10Q53GL7 1025 aa19.79■□□□□ 0.76
GDPD3-201ENST00000360688 MAP1SQ66K74 1059 aaPredicted RBP19.79■□□□□ 0.76
GDPD3-201ENST00000360688 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
GDPD3-201ENST00000360688 GJA3Q9Y6H8 435 aa19.79■□□□□ 0.76
GDPD3-201ENST00000360688 ANKRD36CQ5JPF3 1778 aa19.79■□□□□ 0.76
GDPD3-201ENST00000360688 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
GDPD3-201ENST00000360688 EIF6P56537 245 aaKnown RBP19.78■□□□□ 0.76
GDPD3-201ENST00000360688 PROSER3Q2NL68 480 aa19.78■□□□□ 0.76
GDPD3-201ENST00000360688 CNTROBQ8N137 903 aa19.78■□□□□ 0.76
GDPD3-201ENST00000360688 LARGE2Q8N3Y3 721 aa19.78■□□□□ 0.76
GDPD3-201ENST00000360688 LAMB2P55268 1798 aa19.78■□□□□ 0.76
GDPD3-201ENST00000360688 ANXA1P04083 346 aa19.77■□□□□ 0.76
GDPD3-201ENST00000360688 VEGFBP49765 207 aa19.77■□□□□ 0.76
GDPD3-201ENST00000360688 NLRP3Q96P20 1036 aa19.77■□□□□ 0.76
GDPD3-201ENST00000360688 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
GDPD3-201ENST00000360688 FOXN1O15353 648 aa19.76■□□□□ 0.75
GDPD3-201ENST00000360688 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
GDPD3-201ENST00000360688 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
GDPD3-201ENST00000360688 UTP14AQ9BVJ6 771 aaKnown RBP19.76■□□□□ 0.75
GDPD3-201ENST00000360688 SCNN1DP51172 638 aa19.76■□□□□ 0.75
GDPD3-201ENST00000360688 RALBP1Q15311 655 aa19.76■□□□□ 0.75
GDPD3-201ENST00000360688 LMOD1P29536 600 aaPredicted RBP19.75■□□□□ 0.75
GDPD3-201ENST00000360688 ABCC4O15439 1325 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 EPS15P42566 896 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 LMOD3Q0VAK6 560 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 COPS6Q7L5N1 327 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 NIM1KQ8IY84 436 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
GDPD3-201ENST00000360688 RASSF10A6NK89 507 aa19.73■□□□□ 0.75
GDPD3-201ENST00000360688 PPIP5K2O43314 1243 aa19.73■□□□□ 0.75
GDPD3-201ENST00000360688 DEFB115Q30KQ5 88 aa19.73■□□□□ 0.75
GDPD3-201ENST00000360688 NECTIN2Q92692 538 aa19.73■□□□□ 0.75
GDPD3-201ENST00000360688 TAF1P21675 1872 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 TRPM7Q96QT4 1865 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
GDPD3-201ENST00000360688 AOC3Q16853 763 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 HSP90AB3PQ58FF7 597 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 NLRP10Q86W26 655 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 XAGE3Q8WTP9 111 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
GDPD3-201ENST00000360688 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
GDPD3-201ENST00000360688 DDX21Q9NR30 783 aaKnown RBP eCLIP19.72■□□□□ 0.75
GDPD3-201ENST00000360688 HCLS1P14317 486 aaPredicted RBP19.71■□□□□ 0.75
GDPD3-201ENST00000360688 USP50Q70EL3 339 aaPredicted RBP19.71■□□□□ 0.75
GDPD3-201ENST00000360688 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
GDPD3-201ENST00000360688 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
GDPD3-201ENST00000360688 WBP1LQ9NX94 342 aa19.71■□□□□ 0.75
GDPD3-201ENST00000360688 CTCFP49711 727 aaPredicted RBP19.7■□□□□ 0.74
GDPD3-201ENST00000360688 FMR1Q06787 632 aaKnown RBP eCLIP19.7■□□□□ 0.74
GDPD3-201ENST00000360688 TCIRG1Q13488 830 aa19.7■□□□□ 0.74
GDPD3-201ENST00000360688 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
GDPD3-201ENST00000360688 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
GDPD3-201ENST00000360688 RTFDC1Q9BY42 306 aaPredicted RBP19.7■□□□□ 0.74
GDPD3-201ENST00000360688 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
GDPD3-201ENST00000360688 CHL1O00533 1208 aa19.69■□□□□ 0.74
GDPD3-201ENST00000360688 BBOX1O75936 387 aa19.69■□□□□ 0.74
GDPD3-201ENST00000360688 NEUROD2Q15784 382 aa19.69■□□□□ 0.74
GDPD3-201ENST00000360688 SUPT20HQ8NEM7 779 aa19.69■□□□□ 0.74
GDPD3-201ENST00000360688 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
GDPD3-201ENST00000360688 CXCL9Q07325 125 aa19.68■□□□□ 0.74
GDPD3-201ENST00000360688 DPP8Q6V1X1 898 aaPredicted RBP19.68■□□□□ 0.74
GDPD3-201ENST00000360688 SP8Q8IXZ3 490 aa19.68■□□□□ 0.74
GDPD3-201ENST00000360688 GPRC5DQ9NZD1 345 aa19.68■□□□□ 0.74
GDPD3-201ENST00000360688 ZNRF3Q9ULT6 936 aa19.68■□□□□ 0.74
GDPD3-201ENST00000360688 SH3TC1Q8TE82 1336 aa19.68■□□□□ 0.74
GDPD3-201ENST00000360688 WDR33Q9C0J8 1336 aaKnown RBP19.68■□□□□ 0.74
GDPD3-201ENST00000360688 ADARB2Q9NS39 739 aaKnown RBP19.67■□□□□ 0.74
GDPD3-201ENST00000360688 TRIM35Q9UPQ4 493 aa19.67■□□□□ 0.74
GDPD3-201ENST00000360688 MYBBP1AQ9BQG0 1328 aaKnown RBP19.67■□□□□ 0.74
GDPD3-201ENST00000360688 DDX60Q8IY21 1712 aaKnown RBP19.67■□□□□ 0.74
GDPD3-201ENST00000360688 TRAF5O00463 557 aa19.66■□□□□ 0.74
GDPD3-201ENST00000360688 DDX46Q7L014 1031 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms