RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 BICC1Q9H694 974 aaKnown RBP24.76■■□□□ 1.55
TRIM3-202ENST00000359518 G3BP1Q13283 466 aaKnown RBP eCLIP24.75■■□□□ 1.55
TRIM3-202ENST00000359518 CKAP2LQ8IYA6 745 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 FSD1Q9BTV5 496 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 FUCA2Q9BTY2 467 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 PSME1Q06323 249 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 ZSCAN31Q96LW9 406 aaPredicted RBP24.75■■□□□ 1.55
TRIM3-202ENST00000359518 SH2B1Q9NRF2 756 aaPredicted RBP24.75■■□□□ 1.55
TRIM3-202ENST00000359518 USP42Q9H9J4 1324 aaKnown RBP24.75■■□□□ 1.55
TRIM3-202ENST00000359518 LIG1P18858 919 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 KSR2Q6VAB6 950 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 NDUFB9Q9Y6M9 179 aa24.75■■□□□ 1.55
TRIM3-202ENST00000359518 ESCO1Q5FWF5 840 aa24.74■■□□□ 1.55
TRIM3-202ENST00000359518 C1orf141Q5JVX7 400 aa24.74■■□□□ 1.55
TRIM3-202ENST00000359518 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
TRIM3-202ENST00000359518 SLC27A2O14975 620 aa24.73■■□□□ 1.55
TRIM3-202ENST00000359518 AKAP4Q5JQC9 854 aa24.73■■□□□ 1.55
TRIM3-202ENST00000359518 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
TRIM3-202ENST00000359518 KAZALD1Q96I82 304 aa24.73■■□□□ 1.55
TRIM3-202ENST00000359518 HOXB7P09629 217 aa24.73■■□□□ 1.55
TRIM3-202ENST00000359518 PLEKHO1Q53GL0 409 aaPredicted RBP24.73■■□□□ 1.55
TRIM3-202ENST00000359518 MTX1Q13505 466 aa24.72■■□□□ 1.55
TRIM3-202ENST00000359518 RNMTO43148 476 aaKnown RBP24.72■■□□□ 1.55
TRIM3-202ENST00000359518 PYCARDQ9ULZ3 195 aa24.72■■□□□ 1.55
TRIM3-202ENST00000359518 CCDC9Q9Y3X0 531 aaKnown RBP24.72■■□□□ 1.55
TRIM3-202ENST00000359518 TM6SF1Q9BZW5 370 aa24.72■■□□□ 1.55
TRIM3-202ENST00000359518 PODXL2Q9NZ53 605 aa24.72■■□□□ 1.55
TRIM3-202ENST00000359518 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.71■■□□□ 1.55
TRIM3-202ENST00000359518 GRM8O00222 908 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 CHGBP05060 677 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 ERC1Q8IUD2 1116 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 MYRIPQ8NFW9 859 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 MYL6BP14649 208 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 KRT85P78386 507 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 BLOC1S2Q6QNY1 142 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 ZNF589Q86UQ0 364 aaPredicted RBP24.71■■□□□ 1.55
TRIM3-202ENST00000359518 LUZP1Q86V48 1076 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 MAP4K1Q92918 833 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 MAP7D2Q96T17 732 aa24.71■■□□□ 1.55
TRIM3-202ENST00000359518 CCDC192P0DO97 292 aa24.7■■□□□ 1.55
TRIM3-202ENST00000359518 SLC39A6Q13433 755 aa24.7■■□□□ 1.54
TRIM3-202ENST00000359518 KCNF1Q9H3M0 494 aa24.7■■□□□ 1.54
TRIM3-202ENST00000359518 ALDH1L1O75891 902 aa24.7■■□□□ 1.54
TRIM3-202ENST00000359518 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
TRIM3-202ENST00000359518 LARP1Q6PKG0 1096 aaKnown RBP24.7■■□□□ 1.54
TRIM3-202ENST00000359518 GOLGA6L4A6NEF3 574 aa24.69■■□□□ 1.54
TRIM3-202ENST00000359518 DACT1Q9NYF0 836 aa24.69■■□□□ 1.54
TRIM3-202ENST00000359518 RIC3Q7Z5B4 369 aa24.68■■□□□ 1.54
TRIM3-202ENST00000359518 NUP62CLQ9H1M0 184 aa24.68■■□□□ 1.54
TRIM3-202ENST00000359518 DDX11Q96FC9 970 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 PRDM10Q9NQV6 1147 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 FOSBP53539 338 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 MAP3K11Q16584 847 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 KCNB2Q92953 911 aa24.67■■□□□ 1.54
TRIM3-202ENST00000359518 PSMA5P28066 241 aa24.66■■□□□ 1.54
TRIM3-202ENST00000359518 LINS1Q8NG48 757 aa24.66■■□□□ 1.54
TRIM3-202ENST00000359518 CHMP4AQ9BY43 222 aa24.66■■□□□ 1.54
TRIM3-202ENST00000359518 JAK2O60674 1132 aa24.66■■□□□ 1.54
TRIM3-202ENST00000359518 TYRO3Q06418 890 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 SPATA32Q96LK8 384 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
TRIM3-202ENST00000359518 PPFIA3O75145 1194 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 PTGS1P23219 599 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 EPHA10Q5JZY3 1008 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 LRRC2Q9BYS8 371 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 TNMDQ9H2S6 317 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 PXDNQ92626 1479 aa24.65■■□□□ 1.54
TRIM3-202ENST00000359518 CEBPZQ03701 1054 aaKnown RBP24.64■■□□□ 1.54
TRIM3-202ENST00000359518 TOB2Q14106 344 aaPredicted RBP24.64■■□□□ 1.54
TRIM3-202ENST00000359518 IGKV5-2P06315 115 aa24.64■■□□□ 1.54
TRIM3-202ENST00000359518 CCDC129Q6ZRS4 1044 aa24.64■■□□□ 1.54
TRIM3-202ENST00000359518 MRVI1Q9Y6F6 885 aa24.64■■□□□ 1.54
TRIM3-202ENST00000359518 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.53
TRIM3-202ENST00000359518 RNF20Q5VTR2 975 aa24.64■■□□□ 1.53
TRIM3-202ENST00000359518 DRC7Q8IY82 874 aa24.64■■□□□ 1.53
TRIM3-202ENST00000359518 ZNF710Q8N1W2 664 aa24.64■■□□□ 1.53
TRIM3-202ENST00000359518 ANKARQ7Z5J8 1434 aa24.63■■□□□ 1.53
TRIM3-202ENST00000359518 RPS6KB1P23443 525 aa24.63■■□□□ 1.53
TRIM3-202ENST00000359518 ANO6Q4KMQ2 910 aa24.63■■□□□ 1.53
TRIM3-202ENST00000359518 KIAA1524Q8TCG1 905 aa24.63■■□□□ 1.53
TRIM3-202ENST00000359518 FAM200AQ8TCP9 573 aa24.62■■□□□ 1.53
TRIM3-202ENST00000359518 PRIMPOLQ96LW4 560 aa24.62■■□□□ 1.53
TRIM3-202ENST00000359518 SEC62Q99442 399 aaKnown RBP24.62■■□□□ 1.53
TRIM3-202ENST00000359518 ANKRD24Q8TF21 1146 aa24.62■■□□□ 1.53
TRIM3-202ENST00000359518 SPTLC3Q9NUV7 552 aa24.62■■□□□ 1.53
TRIM3-202ENST00000359518 DDX58O95786 925 aaKnown RBP24.61■■□□□ 1.53
TRIM3-202ENST00000359518 GCP02774 474 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 BICD2Q8TD16 824 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 DNAJC2Q99543 621 aaKnown RBP24.61■■□□□ 1.53
TRIM3-202ENST00000359518 LTN1O94822 1766 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 RGPD2P0DJD1 1756 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 HIP1O00291 1037 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 PDCP20941 246 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 HMGN5P82970 282 aaKnown RBP24.61■■□□□ 1.53
TRIM3-202ENST00000359518 LRMPQ12912 555 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 MYD88Q99836 296 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 NRBP1Q9UHY1 535 aa24.61■■□□□ 1.53
TRIM3-202ENST00000359518 HSP90B1P14625 803 aaKnown RBP24.61■■□□□ 1.53
TRIM3-202ENST00000359518 AMOTQ4VCS5 1084 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms