RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 TFIP11Q9UBB9 837 aaKnown RBP12.96□□□□□ -0.33
RPE-202ENST00000359429 CCDC171Q6TFL3 1326 aa12.96□□□□□ -0.33
RPE-202ENST00000359429 UTP14CQ5TAP6 766 aaKnown RBP12.96□□□□□ -0.34
RPE-202ENST00000359429 CCDC186Q7Z3E2 898 aa12.96□□□□□ -0.34
RPE-202ENST00000359429 ECHDC1Q9NTX5 307 aa12.96□□□□□ -0.34
RPE-202ENST00000359429 DACT1Q9NYF0 836 aa12.96□□□□□ -0.34
RPE-202ENST00000359429 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
RPE-202ENST00000359429 KRT85P78386 507 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 ANO6Q4KMQ2 910 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 CLASRPQ8N2M8 674 aaKnown RBP12.95□□□□□ -0.34
RPE-202ENST00000359429 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 CBX8Q9HC52 389 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 ADCY9O60503 1353 aa12.95□□□□□ -0.34
RPE-202ENST00000359429 TPM3P06753 285 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
RPE-202ENST00000359429 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 SLC27A2O14975 620 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
RPE-202ENST00000359429 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
RPE-202ENST00000359429 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 NAA30Q147X3 362 aaPredicted RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 C16orf45Q96MC5 204 aaPredicted RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 TNMDQ9H2S6 317 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 ELP1O95163 1332 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 TNRQ92752 1358 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 MTX1Q13505 466 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 AACSQ86V21 672 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 EVI5LQ96CN4 794 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 ESF1Q9H501 851 aaKnown RBP12.93□□□□□ -0.34
RPE-202ENST00000359429 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
RPE-202ENST00000359429 A0A0D9SFI3 127 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 NR1I2O75469 434 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 KCNJ4P48050 445 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 STK3Q13188 491 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 CWF19L2Q2TBE0 894 aaKnown RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 CEMIPQ8WUJ3 1361 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 IGSF3O75054 1194 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 SASH1O94885 1247 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 TOB2Q14106 344 aaPredicted RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 PLA2G4DQ86XP0 818 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 CCDC8Q9H0W5 538 aaPredicted RBP12.92□□□□□ -0.34
RPE-202ENST00000359429 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
RPE-202ENST00000359429 ZNF75DP51815 510 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 CCDC144BQ3MJ40 725 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
RPE-202ENST00000359429 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 DNAJC25Q9H1X3 360 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 MAP3K2Q9Y2U5 619 aa12.91□□□□□ -0.34
RPE-202ENST00000359429 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
RPE-202ENST00000359429 CACTINQ8WUQ7 758 aaKnown RBP12.9□□□□□ -0.34
RPE-202ENST00000359429 KAZALD1Q96I82 304 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
RPE-202ENST00000359429 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 JAK2O60674 1132 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 ZNF589Q86UQ0 364 aaPredicted RBP12.9□□□□□ -0.34
RPE-202ENST00000359429 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
RPE-202ENST00000359429 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
RPE-202ENST00000359429 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 TDRD7Q8NHU6 1098 aaKnown RBP12.89□□□□□ -0.35
RPE-202ENST00000359429 DDX11Q96FC9 970 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 GTPBP4Q9BZE4 634 aaKnown RBP12.89□□□□□ -0.35
RPE-202ENST00000359429 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
RPE-202ENST00000359429 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 GOLGA6L4A6NEF3 574 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 TNNT1P13805 278 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 ZNF165P49910 485 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
RPE-202ENST00000359429 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
RPE-202ENST00000359429 PDCP20941 246 aa12.88□□□□□ -0.35
RPE-202ENST00000359429 PSMA5P28066 241 aa12.88□□□□□ -0.35
RPE-202ENST00000359429 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
RPE-202ENST00000359429 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
RPE-202ENST00000359429 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
RPE-202ENST00000359429 CHGBP05060 677 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 260.8 ms