RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 USP25Q9UHP3 1055 aa18.58■□□□□ 0.57
EPHB4-201ENST00000358173 KINO60870 393 aaKnown RBP18.58■□□□□ 0.56
EPHB4-201ENST00000358173 CTNNA3Q9UI47 895 aa18.58■□□□□ 0.56
EPHB4-201ENST00000358173 TPD52L1Q16890 204 aaPredicted RBP18.58■□□□□ 0.56
EPHB4-201ENST00000358173 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
EPHB4-201ENST00000358173 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
EPHB4-201ENST00000358173 ABCC4O15439 1325 aa18.57■□□□□ 0.56
EPHB4-201ENST00000358173 PES1O00541 588 aaKnown RBP18.57■□□□□ 0.56
EPHB4-201ENST00000358173 TPM3P06753 285 aa18.57■□□□□ 0.56
EPHB4-201ENST00000358173 IMMTQ16891 758 aaKnown RBP18.57■□□□□ 0.56
EPHB4-201ENST00000358173 ZGPATQ8N5A5 531 aaKnown RBP18.57■□□□□ 0.56
EPHB4-201ENST00000358173 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
EPHB4-201ENST00000358173 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
EPHB4-201ENST00000358173 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
EPHB4-201ENST00000358173 MINDY4BA8MYZ0 360 aa18.56■□□□□ 0.56
EPHB4-201ENST00000358173 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
EPHB4-201ENST00000358173 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
EPHB4-201ENST00000358173 DZIP3Q86Y13 1208 aaKnown RBP18.56■□□□□ 0.56
EPHB4-201ENST00000358173 CLSTN1O94985 981 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 ZSCAN31Q96LW9 406 aaPredicted RBP18.55■□□□□ 0.56
EPHB4-201ENST00000358173 PHKG2P15735 406 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 TFCP2Q12800 502 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 CAMK4Q16566 473 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 PROSER3Q2NL68 480 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 CCDC82Q8N4S0 544 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 NUP62CLQ9H1M0 184 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 LIMCH1Q9UPQ0 1083 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 HOXB7P09629 217 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
EPHB4-201ENST00000358173 SPATA32Q96LK8 384 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
EPHB4-201ENST00000358173 TIMM10P62072 90 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
EPHB4-201ENST00000358173 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
EPHB4-201ENST00000358173 ZNF853P0CG23 659 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 PIBF1Q8WXW3 757 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 CAMSAP1Q5T5Y3 1602 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 GUCY1B3Q02153 619 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 RAB11FIP4Q86YS3 637 aa18.54■□□□□ 0.56
EPHB4-201ENST00000358173 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
EPHB4-201ENST00000358173 STK38Q15208 465 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 CCDC183Q5T5S1 534 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 METTL22Q9BUU2 404 aaPredicted RBP18.53■□□□□ 0.56
EPHB4-201ENST00000358173 NDUFB9Q9Y6M9 179 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 SLC5A1P13866 664 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 NAPBQ9H115 298 aa18.53■□□□□ 0.56
EPHB4-201ENST00000358173 CHMLP26374 656 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 ATP2B3Q16720 1220 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 NECAB1Q8N987 351 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 CCDC69A6NI79 296 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 ME1P48163 572 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 ATP2B2Q01814 1243 aa18.52■□□□□ 0.56
EPHB4-201ENST00000358173 ZNF594Q96JF6 807 aaPredicted RBP18.52■□□□□ 0.56
EPHB4-201ENST00000358173 RBM8AQ9Y5S9 174 aaKnown RBP18.52■□□□□ 0.56
EPHB4-201ENST00000358173 MAP3K12Q12852 859 aa18.51■□□□□ 0.55
EPHB4-201ENST00000358173 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
EPHB4-201ENST00000358173 RTL1A6NKG5 1358 aa18.51■□□□□ 0.55
EPHB4-201ENST00000358173 NAT10Q9H0A0 1025 aaKnown RBP18.51■□□□□ 0.55
EPHB4-201ENST00000358173 IL15P40933 162 aaPredicted RBP18.51■□□□□ 0.55
EPHB4-201ENST00000358173 NMIQ13287 307 aaPredicted RBP18.51■□□□□ 0.55
EPHB4-201ENST00000358173 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
EPHB4-201ENST00000358173 ERBB3P21860 1342 aa18.51■□□□□ 0.55
EPHB4-201ENST00000358173 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 MAP3K11Q16584 847 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 IRS4O14654 1257 aaPredicted RBP18.5■□□□□ 0.55
EPHB4-201ENST00000358173 DTNBO60941 627 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 CPA1P15085 419 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 PKNOX2Q96KN3 472 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
EPHB4-201ENST00000358173 ZNF213O14771 459 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 GCKRQ14397 625 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 NBPF5PQ86XG9 351 aaPredicted RBP18.5■□□□□ 0.55
EPHB4-201ENST00000358173 PLBD2Q8NHP8 589 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
EPHB4-201ENST00000358173 SMC2O95347 1197 aa18.49■□□□□ 0.55
EPHB4-201ENST00000358173 LRSAM1Q6UWE0 723 aa18.49■□□□□ 0.55
EPHB4-201ENST00000358173 AK7Q96M32 723 aa18.49■□□□□ 0.55
EPHB4-201ENST00000358173 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
EPHB4-201ENST00000358173 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
EPHB4-201ENST00000358173 STX6O43752 255 aa18.49■□□□□ 0.55
EPHB4-201ENST00000358173 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
EPHB4-201ENST00000358173 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
EPHB4-201ENST00000358173 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
EPHB4-201ENST00000358173 XBP1P17861 261 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 RFC4P35249 363 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 FAM98CQ17RN3 349 aaKnown RBP18.48■□□□□ 0.55
EPHB4-201ENST00000358173 SLC4A8Q2Y0W8 1093 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 NEXMIFQ5QGS0 1516 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 TTLL7Q6ZT98 887 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 PTPRMP28827 1452 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 CKAP2LQ8IYA6 745 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 TRIM22Q8IYM9 498 aa18.48■□□□□ 0.55
EPHB4-201ENST00000358173 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
EPHB4-201ENST00000358173 NEK1Q96PY6 1258 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms