RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 AEBP2Q6ZN18 517 aaPredicted RBP11.78□□□□□ -0.52
RNF40-202ENST00000357890 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 AACSQ86V21 672 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 FSD1Q9BTV5 496 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 CLIP2Q9UDT6 1046 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
RNF40-202ENST00000357890 LRMPQ12912 555 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 GOLGA6L1Q8N7Z2 621 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 KCNA6P17658 529 aa11.78□□□□□ -0.52
RNF40-202ENST00000357890 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.52
RNF40-202ENST00000357890 MAP3K11Q16584 847 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 RNF20Q5VTR2 975 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 LUZP1Q86V48 1076 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 USP44Q9H0E7 712 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 TOMM22Q9NS69 142 aa11.77□□□□□ -0.52
RNF40-202ENST00000357890 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.53
RNF40-202ENST00000357890 ZSCAN22P10073 491 aaPredicted RBP11.77□□□□□ -0.53
RNF40-202ENST00000357890 AK2P54819 239 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 GPATCH11Q8N954 259 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 GJB2P29033 226 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 C10orf67Q8IYJ2 551 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 NECAB1Q8N987 351 aa11.77□□□□□ -0.53
RNF40-202ENST00000357890 TAF7LQ5H9L4 462 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
RNF40-202ENST00000357890 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
RNF40-202ENST00000357890 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 TFIP11Q9UBB9 837 aaKnown RBP11.76□□□□□ -0.53
RNF40-202ENST00000357890 SYT1P21579 422 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 UBE2HP62256 183 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 KRT85P78386 507 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 DNM1Q05193 864 aaKnown RBP11.76□□□□□ -0.53
RNF40-202ENST00000357890 MPRIPQ6WCQ1 1025 aa11.76□□□□□ -0.53
RNF40-202ENST00000357890 DBF4Q9UBU7 674 aaPredicted RBP11.76□□□□□ -0.53
RNF40-202ENST00000357890 AOX1Q06278 1338 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 CYP2E1P05181 493 aaPredicted RBP11.75□□□□□ -0.53
RNF40-202ENST00000357890 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 RBM33Q96EV2 1170 aaKnown RBP11.75□□□□□ -0.53
RNF40-202ENST00000357890 SMC2O95347 1197 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
RNF40-202ENST00000357890 ELF2Q15723 593 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 RGS12O14924 1447 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 PSMA5P28066 241 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 SSH3Q8TE77 659 aa11.75□□□□□ -0.53
RNF40-202ENST00000357890 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
RNF40-202ENST00000357890 SETD1BQ9UPS6 1966 aaKnown RBP11.75□□□□□ -0.53
RNF40-202ENST00000357890 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 KIF18AQ8NI77 898 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 BOLA2Q9H3K6 86 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 SMTNL1A8MU46 457 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
RNF40-202ENST00000357890 IP6K1Q92551 441 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 KDRP35968 1356 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 PDCP20941 246 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 UBXN4Q92575 508 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 CWC15Q9P013 229 aaKnown RBP11.74□□□□□ -0.53
RNF40-202ENST00000357890 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
RNF40-202ENST00000357890 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
RNF40-202ENST00000357890 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 F13A1P00488 732 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 IRX5P78411 483 aaPredicted RBP11.73□□□□□ -0.53
RNF40-202ENST00000357890 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 SNX14Q9Y5W7 946 aa11.73□□□□□ -0.53
RNF40-202ENST00000357890 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
RNF40-202ENST00000357890 ZNF397Q8NF99 534 aaPredicted RBP11.73□□□□□ -0.53
RNF40-202ENST00000357890 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
RNF40-202ENST00000357890 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 SGSM2O43147 1006 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 HOXB7P09629 217 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 HSPA4P34932 840 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 ZNF165P49910 485 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 PAXBP1Q9Y5B6 917 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 HIP1O00291 1037 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 EPB41L2O43491 1005 aaKnown RBP11.72□□□□□ -0.53
RNF40-202ENST00000357890 TPM4P67936 248 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 SF3A1Q15459 793 aaKnown RBP11.72□□□□□ -0.53
RNF40-202ENST00000357890 AKAP4Q5JQC9 854 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 SPATA32Q96LK8 384 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 MAP3K2Q9Y2U5 619 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 EIF4A1P60842 406 aaKnown RBP11.72□□□□□ -0.53
RNF40-202ENST00000357890 CUL4AQ13619 759 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
RNF40-202ENST00000357890 LMAN1P49257 510 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 BMS1Q14692 1282 aaKnown RBP11.71□□□□□ -0.53
RNF40-202ENST00000357890 FAM173BQ6P4H8 233 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 ZNF215Q9UL58 517 aaPredicted RBP11.71□□□□□ -0.53
RNF40-202ENST00000357890 C3P01024 1663 aa11.71□□□□□ -0.53
RNF40-202ENST00000357890 SKILP12757 684 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms