RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 HOOK2Q96ED9 719 aa12.74□□□□□ -0.37
FN1-205ENST00000357867 BIN2Q9UBW5 565 aaPredicted RBP12.74□□□□□ -0.37
FN1-205ENST00000357867 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.74□□□□□ -0.37
FN1-205ENST00000357867 KIAA1328Q86T90 577 aa12.74□□□□□ -0.37
FN1-205ENST00000357867 SYCP3Q8IZU3 236 aa12.74□□□□□ -0.37
FN1-205ENST00000357867 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
FN1-205ENST00000357867 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 CCDC8Q9H0W5 538 aaPredicted RBP12.73□□□□□ -0.37
FN1-205ENST00000357867 GOLIM4O00461 696 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
FN1-205ENST00000357867 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
FN1-205ENST00000357867 EIF6P56537 245 aaKnown RBP12.73□□□□□ -0.37
FN1-205ENST00000357867 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 STX8Q9UNK0 236 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 KRT23Q9C075 422 aa12.73□□□□□ -0.37
FN1-205ENST00000357867 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 ANKRD62A6NC57 917 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 PICK1Q9NRD5 415 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
FN1-205ENST00000357867 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 TMTC2Q8N394 836 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 FANCIQ9NVI1 1328 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 VAT1LQ9HCJ6 419 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 GNPATO15228 680 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 IFIT1BQ5T764 474 aaKnown RBP12.72□□□□□ -0.37
FN1-205ENST00000357867 FLT4P35916 1363 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 NUP160Q12769 1436 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 NFKBIBQ15653 356 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 USP21Q9UK80 565 aa12.72□□□□□ -0.37
FN1-205ENST00000357867 CEP170Q5SW79 1584 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 F8W031 263 aaPredicted RBP12.71□□□□□ -0.37
FN1-205ENST00000357867 H0YIN7 160 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 KIF4AO95239 1232 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 NAA16Q6N069 864 aaPredicted RBP12.71□□□□□ -0.37
FN1-205ENST00000357867 ERMNQ8TAM6 284 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 DDX11Q96FC9 970 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
FN1-205ENST00000357867 F6X3S4 739 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 BAG6P46379 1132 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 GNAQP50148 359 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 CACNA2D4Q7Z3S7 1137 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
FN1-205ENST00000357867 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.38
FN1-205ENST00000357867 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.38
FN1-205ENST00000357867 NUP153P49790 1475 aaKnown RBP12.71□□□□□ -0.38
FN1-205ENST00000357867 GRM8O00222 908 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 USP37Q86T82 979 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 IL16Q14005 1332 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 BICD1Q96G01 975 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 ZFYVE9O95405 1425 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
FN1-205ENST00000357867 ENOX2Q16206 610 aaKnown RBP12.7□□□□□ -0.38
FN1-205ENST00000357867 CNBD1Q8NA66 436 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
FN1-205ENST00000357867 ZCCHC11Q5TAX3 1644 aaKnown RBP12.7□□□□□ -0.38
FN1-205ENST00000357867 GNAT2P19087 354 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 CYP7A1P22680 504 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 NFATC2IPQ8NCF5 419 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
FN1-205ENST00000357867 SKIDA1Q1XH10 827 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 NUP62CLQ9H1M0 184 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 ESR2Q92731 530 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 UPF3BQ9BZI7 483 aaKnown RBP12.69□□□□□ -0.38
FN1-205ENST00000357867 SHANK2Q9UPX8 1470 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 TRAK2O60296 914 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 LIG1P18858 919 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
FN1-205ENST00000357867 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 TAF4BQ92750 862 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 CCDC174Q6PII3 467 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
FN1-205ENST00000357867 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
FN1-205ENST00000357867 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
FN1-205ENST00000357867 PICALMQ13492 652 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 MCM5P33992 734 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 CCDC87Q9NVE4 849 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 SPA17Q15506 151 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 CCDC191Q8NCU4 936 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
FN1-205ENST00000357867 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
FN1-205ENST00000357867 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
FN1-205ENST00000357867 GCP02774 474 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms