RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 NEURL1BA8MQ27 555 aa22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 TRIM28Q13263 835 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 BEND3Q5T5X7 828 aa22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 GOLGB1Q14789 3259 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 FAM89AQ96GI7 184 aa22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 CWC25Q9NXE8 425 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-202ENST00000355841 TRIM27P14373 513 aa22.7■■□□□ 1.22
PDLIM7-202ENST00000355841 CCDC191Q8NCU4 936 aa22.7■■□□□ 1.22
PDLIM7-202ENST00000355841 LINS1Q8NG48 757 aa22.7■■□□□ 1.22
PDLIM7-202ENST00000355841 CLUAP1Q96AJ1 413 aa22.7■■□□□ 1.22
PDLIM7-202ENST00000355841 NYXQ9GZU5 481 aa22.7■■□□□ 1.22
PDLIM7-202ENST00000355841 C10orf71Q711Q0 1435 aa22.69■■□□□ 1.22
PDLIM7-202ENST00000355841 ABCC12Q96J65 1359 aa22.69■■□□□ 1.22
PDLIM7-202ENST00000355841 ST5P78524 1137 aa22.69■■□□□ 1.22
PDLIM7-202ENST00000355841 NLGN2Q8NFZ4 835 aa22.69■■□□□ 1.22
PDLIM7-202ENST00000355841 NRXN2Q9P2S2 1712 aa22.69■■□□□ 1.22
PDLIM7-202ENST00000355841 IPO8O15397 1037 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 ATF7IPQ6VMQ6 1270 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 API5Q9BZZ5 524 aaKnown RBP22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 PLIN1O60240 522 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 ZKSCAN2Q63HK3 967 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 ARHGAP45Q92619 1136 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 SYT17Q9BSW7 474 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 CD2APQ9Y5K6 639 aa22.68■■□□□ 1.22
PDLIM7-202ENST00000355841 HCLS1P14317 486 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-202ENST00000355841 GCKRQ14397 625 aa22.67■■□□□ 1.22
PDLIM7-202ENST00000355841 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
PDLIM7-202ENST00000355841 SH3TC1Q8TE82 1336 aa22.66■■□□□ 1.22
PDLIM7-202ENST00000355841 WWC3Q9ULE0 1092 aa22.66■■□□□ 1.22
PDLIM7-202ENST00000355841 IBTKQ9P2D0 1353 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-202ENST00000355841 A0A0G2JLW4 131 aa22.65■■□□□ 1.22
PDLIM7-202ENST00000355841 CHRNA5P30532 468 aa22.65■■□□□ 1.22
PDLIM7-202ENST00000355841 C3orf67Q6ZVT6 689 aa22.65■■□□□ 1.22
PDLIM7-202ENST00000355841 ZBTB38Q8NAP3 1195 aaPredicted RBP22.65■■□□□ 1.22
PDLIM7-202ENST00000355841 BRIP1Q9BX63 1249 aa22.65■■□□□ 1.22
PDLIM7-202ENST00000355841 UBE3BQ7Z3V4 1068 aa22.64■■□□□ 1.21
PDLIM7-202ENST00000355841 ABCC4O15439 1325 aa22.63■■□□□ 1.21
PDLIM7-202ENST00000355841 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
PDLIM7-202ENST00000355841 DPEP1P16444 411 aa22.63■■□□□ 1.21
PDLIM7-202ENST00000355841 IRS4O14654 1257 aaPredicted RBP22.62■■□□□ 1.21
PDLIM7-202ENST00000355841 RLBP1P12271 317 aa22.62■■□□□ 1.21
PDLIM7-202ENST00000355841 ANKRD31Q8N7Z5 1873 aa22.62■■□□□ 1.21
PDLIM7-202ENST00000355841 ALDH1L1O75891 902 aa22.62■■□□□ 1.21
PDLIM7-202ENST00000355841 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
PDLIM7-202ENST00000355841 PXDNLA1KZ92 1463 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 TNRC6CQ9HCJ0 1690 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 H7C1W4 665 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 PDE6BP35913 854 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 CCT4P50991 539 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 SLC10A5Q5PT55 438 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
PDLIM7-202ENST00000355841 KIF13BQ9NQT8 1826 aa22.6■■□□□ 1.21
PDLIM7-202ENST00000355841 TGFB2P61812 414 aa22.6■■□□□ 1.21
PDLIM7-202ENST00000355841 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-202ENST00000355841 DZIP1LQ8IYY4 767 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-202ENST00000355841 TMEM57Q8N5G2 664 aa22.6■■□□□ 1.21
PDLIM7-202ENST00000355841 GRM8O00222 908 aa22.59■■□□□ 1.21
PDLIM7-202ENST00000355841 NBPF7P0C2Y1 421 aaPredicted RBP22.59■■□□□ 1.21
PDLIM7-202ENST00000355841 KCNA3P22001 575 aa22.59■■□□□ 1.21
PDLIM7-202ENST00000355841 CASP7P55210 303 aa22.59■■□□□ 1.21
PDLIM7-202ENST00000355841 N4BP2Q86UW6 1770 aaPredicted RBP22.59■■□□□ 1.21
PDLIM7-202ENST00000355841 H0YIN7 160 aa22.58■■□□□ 1.21
PDLIM7-202ENST00000355841 INTS3Q68E01 1043 aaKnown RBP22.58■■□□□ 1.21
PDLIM7-202ENST00000355841 NLRP3Q96P20 1036 aa22.58■■□□□ 1.21
PDLIM7-202ENST00000355841 ZNF622Q969S3 477 aaKnown RBP eCLIP22.58■■□□□ 1.2
PDLIM7-202ENST00000355841 USP44Q9H0E7 712 aa22.58■■□□□ 1.2
PDLIM7-202ENST00000355841 UTRNP46939 3433 aa22.58■■□□□ 1.2
PDLIM7-202ENST00000355841 KLRG2A4D1S0 409 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-202ENST00000355841 SRGNP10124 158 aa22.57■■□□□ 1.2
PDLIM7-202ENST00000355841 C20orf194Q5TEA3 1177 aa22.57■■□□□ 1.2
PDLIM7-202ENST00000355841 CCDC85AQ96PX6 553 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-202ENST00000355841 KIAA1551Q9HCM1 1747 aa22.57■■□□□ 1.2
PDLIM7-202ENST00000355841 CDHR2Q9BYE9 1310 aa22.56■■□□□ 1.2
PDLIM7-202ENST00000355841 COL11A2P13942 1736 aaPredicted RBP22.56■■□□□ 1.2
PDLIM7-202ENST00000355841 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
PDLIM7-202ENST00000355841 DDX60Q8IY21 1712 aaKnown RBP22.55■■□□□ 1.2
PDLIM7-202ENST00000355841 PDE8AO60658 829 aa22.55■■□□□ 1.2
PDLIM7-202ENST00000355841 ITPRIPQ8IWB1 547 aa22.55■■□□□ 1.2
PDLIM7-202ENST00000355841 MEIS3Q99687 375 aa22.55■■□□□ 1.2
PDLIM7-202ENST00000355841 RIC1Q4ADV7 1423 aa22.54■■□□□ 1.2
PDLIM7-202ENST00000355841 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
PDLIM7-202ENST00000355841 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.54■■□□□ 1.2
PDLIM7-202ENST00000355841 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
PDLIM7-202ENST00000355841 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
PDLIM7-202ENST00000355841 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
PDLIM7-202ENST00000355841 MASTLQ96GX5 879 aa22.53■■□□□ 1.2
PDLIM7-202ENST00000355841 SUCLG2Q96I99 432 aa22.53■■□□□ 1.2
PDLIM7-202ENST00000355841 PIM2Q9P1W9 311 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 UTYO14607 1347 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 NPR1P16066 1061 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 CTSWP56202 376 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 KAZALD1Q96I82 304 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 COG6Q9Y2V7 657 aa22.52■■□□□ 1.2
PDLIM7-202ENST00000355841 FOXO4P98177 505 aa22.51■■□□□ 1.19
PDLIM7-202ENST00000355841 SF3B3Q15393 1217 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-202ENST00000355841 PDZRN3Q9UPQ7 1066 aa22.51■■□□□ 1.19
PDLIM7-202ENST00000355841 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
PDLIM7-202ENST00000355841 HSP90B1P14625 803 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms