RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 CRY2Q49AN0 593 aa26.08■■□□□ 1.77
HCFC1R1-202ENST00000354679 RNF181Q9P0P0 153 aa26.08■■□□□ 1.77
HCFC1R1-202ENST00000354679 CACNA1SQ13698 1873 aa26.08■■□□□ 1.77
HCFC1R1-202ENST00000354679 RNF123Q5XPI4 1314 aa26.08■■□□□ 1.77
HCFC1R1-202ENST00000354679 GOLGA2Q08379 1002 aa26.07■■□□□ 1.76
HCFC1R1-202ENST00000354679 ZNF526Q8TF50 670 aaPredicted RBP26.07■■□□□ 1.76
HCFC1R1-202ENST00000354679 GPBP1L1Q9HC44 474 aaPredicted RBP26.07■■□□□ 1.76
HCFC1R1-202ENST00000354679 NFKBIEO00221 500 aa26.06■■□□□ 1.76
HCFC1R1-202ENST00000354679 SBF1O95248 1867 aa26.05■■□□□ 1.76
HCFC1R1-202ENST00000354679 CCER2I3L3R5 266 aa26.05■■□□□ 1.76
HCFC1R1-202ENST00000354679 ALDH1B1P30837 517 aa26.05■■□□□ 1.76
HCFC1R1-202ENST00000354679 SOGA3Q5TF21 947 aa26.05■■□□□ 1.76
HCFC1R1-202ENST00000354679 RIC3Q7Z5B4 369 aa26.05■■□□□ 1.76
HCFC1R1-202ENST00000354679 LMNB1P20700 586 aa26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 SLC10A5Q5PT55 438 aa26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 RPGRQ92834 1020 aaKnown RBP26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 ISCA1Q9BUE6 129 aa26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 STK31Q9BXU1 1019 aa26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 SPINK5Q9NQ38 1064 aaPredicted RBP26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 TRMT112Q9UI30 125 aaKnown RBP26.04■■□□□ 1.76
HCFC1R1-202ENST00000354679 C3orf67Q6ZVT6 689 aa26.03■■□□□ 1.76
HCFC1R1-202ENST00000354679 C7orf43Q8WVR3 580 aa26.03■■□□□ 1.76
HCFC1R1-202ENST00000354679 NLRP3Q96P20 1036 aa26.03■■□□□ 1.76
HCFC1R1-202ENST00000354679 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
HCFC1R1-202ENST00000354679 TCERG1O14776 1098 aaKnown RBP26.02■■□□□ 1.76
HCFC1R1-202ENST00000354679 PRELPP51888 382 aa26.02■■□□□ 1.76
HCFC1R1-202ENST00000354679 MYH16Q9H6N6 1097 aa26.02■■□□□ 1.76
HCFC1R1-202ENST00000354679 FER1L6Q2WGJ9 1857 aa26.02■■□□□ 1.76
HCFC1R1-202ENST00000354679 DDX58O95786 925 aaKnown RBP26.01■■□□□ 1.75
HCFC1R1-202ENST00000354679 HOXA10P31260 410 aaPredicted RBP26.01■■□□□ 1.75
HCFC1R1-202ENST00000354679 EXOSC9Q06265 439 aaKnown RBP26.01■■□□□ 1.75
HCFC1R1-202ENST00000354679 SH3TC1Q8TE82 1336 aa26.01■■□□□ 1.75
HCFC1R1-202ENST00000354679 ZNF428Q96B54 188 aa26.01■■□□□ 1.75
HCFC1R1-202ENST00000354679 ZNF521Q96K83 1311 aa26■■□□□ 1.75
HCFC1R1-202ENST00000354679 LTBP3Q9NS15 1303 aa26■■□□□ 1.75
HCFC1R1-202ENST00000354679 CCDC93Q567U6 631 aa26■■□□□ 1.75
HCFC1R1-202ENST00000354679 SYNE4Q8N205 404 aa26■■□□□ 1.75
HCFC1R1-202ENST00000354679 RBM17Q96I25 401 aaKnown RBP26■■□□□ 1.75
HCFC1R1-202ENST00000354679 TAOK3Q9H2K8 898 aa26■■□□□ 1.75
HCFC1R1-202ENST00000354679 HCLS1P14317 486 aaPredicted RBP25.99■■□□□ 1.75
HCFC1R1-202ENST00000354679 TRIM28Q13263 835 aaKnown RBP25.99■■□□□ 1.75
HCFC1R1-202ENST00000354679 ZC3H4Q9UPT8 1303 aaKnown RBP25.98■■□□□ 1.75
HCFC1R1-202ENST00000354679 CRAMP1Q96RY5 1269 aa25.98■■□□□ 1.75
HCFC1R1-202ENST00000354679 MYD88Q99836 296 aa25.98■■□□□ 1.75
HCFC1R1-202ENST00000354679 VAMP4O75379 141 aa25.97■■□□□ 1.75
HCFC1R1-202ENST00000354679 SLC4A2P04920 1241 aa25.97■■□□□ 1.75
HCFC1R1-202ENST00000354679 OLFM4Q6UX06 510 aa25.97■■□□□ 1.75
HCFC1R1-202ENST00000354679 FAM89AQ96GI7 184 aa25.96■■□□□ 1.75
HCFC1R1-202ENST00000354679 CCDC88AQ3V6T2 1871 aa25.96■■□□□ 1.75
HCFC1R1-202ENST00000354679 KSR2Q6VAB6 950 aa25.95■■□□□ 1.74
HCFC1R1-202ENST00000354679 G2E3Q7L622 706 aa25.95■■□□□ 1.74
HCFC1R1-202ENST00000354679 METTL22Q9BUU2 404 aaPredicted RBP25.95■■□□□ 1.74
HCFC1R1-202ENST00000354679 MAP3K2Q9Y2U5 619 aa25.95■■□□□ 1.74
HCFC1R1-202ENST00000354679 RTKN2Q8IZC4 609 aa25.94■■□□□ 1.74
HCFC1R1-202ENST00000354679 LAMB2P55268 1798 aa25.94■■□□□ 1.74
HCFC1R1-202ENST00000354679 TIAM2Q8IVF5 1701 aa25.94■■□□□ 1.74
HCFC1R1-202ENST00000354679 PI4KAP2A4QPH2 592 aa25.93■■□□□ 1.74
HCFC1R1-202ENST00000354679 C1QTNF8P60827 252 aa25.93■■□□□ 1.74
HCFC1R1-202ENST00000354679 FKBP4Q02790 459 aaKnown RBP eCLIP25.93■■□□□ 1.74
HCFC1R1-202ENST00000354679 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
HCFC1R1-202ENST00000354679 PI4KAP1Q8N8J0 262 aa25.93■■□□□ 1.74
HCFC1R1-202ENST00000354679 ABCC4O15439 1325 aa25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 KDM2BQ8NHM5 1336 aa25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 PPEF1O14829 653 aaPredicted RBP25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 FLIIQ13045 1269 aa25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 RTL5Q5HYW3 569 aaPredicted RBP25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 CCDC191Q8NCU4 936 aa25.92■■□□□ 1.74
HCFC1R1-202ENST00000354679 DDX60Q8IY21 1712 aaKnown RBP25.91■■□□□ 1.74
HCFC1R1-202ENST00000354679 KIF3CO14782 793 aa25.91■■□□□ 1.74
HCFC1R1-202ENST00000354679 CC2D2BQ6DHV5 1058 aa25.91■■□□□ 1.74
HCFC1R1-202ENST00000354679 NMRK2Q9NPI5 230 aa25.91■■□□□ 1.74
HCFC1R1-202ENST00000354679 CWC25Q9NXE8 425 aaPredicted RBP25.91■■□□□ 1.74
HCFC1R1-202ENST00000354679 DICER1Q9UPY3 1922 aaKnown RBP25.9■■□□□ 1.74
HCFC1R1-202ENST00000354679 SNED1Q8TER0 1413 aa25.9■■□□□ 1.74
HCFC1R1-202ENST00000354679 IRS4O14654 1257 aaPredicted RBP25.9■■□□□ 1.74
HCFC1R1-202ENST00000354679 DDX46Q7L014 1031 aaKnown RBP25.9■■□□□ 1.74
HCFC1R1-202ENST00000354679 ZBTB38Q8NAP3 1195 aaPredicted RBP25.9■■□□□ 1.74
HCFC1R1-202ENST00000354679 NEXNQ0ZGT2 675 aa25.89■■□□□ 1.74
HCFC1R1-202ENST00000354679 ZNF277Q9NRM2 450 aaPredicted RBP25.89■■□□□ 1.74
HCFC1R1-202ENST00000354679 CACNA1FO60840 1977 aa25.89■■□□□ 1.73
HCFC1R1-202ENST00000354679 E9PSI1 815 aa25.88■■□□□ 1.73
HCFC1R1-202ENST00000354679 PCCAP05165 728 aaPredicted RBP25.88■■□□□ 1.73
HCFC1R1-202ENST00000354679 FKBP5Q13451 457 aaPredicted RBP25.88■■□□□ 1.73
HCFC1R1-202ENST00000354679 SLC51AQ86UW1 340 aa25.88■■□□□ 1.73
HCFC1R1-202ENST00000354679 GLTPD2A6NH11 291 aa25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 IGKV5-2P06315 115 aa25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 GRAPQ13588 217 aa25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 SF3B3Q15393 1217 aaKnown RBP25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 GRIPAP1Q4V328 841 aa25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 GRAPLQ8TC17 118 aaPredicted RBP25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 PSMD1Q99460 953 aa25.87■■□□□ 1.73
HCFC1R1-202ENST00000354679 BBOX1O75936 387 aa25.86■■□□□ 1.73
HCFC1R1-202ENST00000354679 HSP90B1P14625 803 aaKnown RBP25.86■■□□□ 1.73
HCFC1R1-202ENST00000354679 TMX4Q9H1E5 349 aaPredicted RBP25.86■■□□□ 1.73
HCFC1R1-202ENST00000354679 ATP6V0A2Q9Y487 856 aa25.86■■□□□ 1.73
HCFC1R1-202ENST00000354679 MIER1Q8N108 512 aa25.85■■□□□ 1.73
HCFC1R1-202ENST00000354679 IARSP41252 1262 aaKnown RBP25.84■■□□□ 1.73
HCFC1R1-202ENST00000354679 DNAAF4Q8WXU2 420 aa25.84■■□□□ 1.73
HCFC1R1-202ENST00000354679 JARID2Q92833 1246 aaPredicted RBP25.84■■□□□ 1.73
HCFC1R1-202ENST00000354679 NEURL1BA8MQ27 555 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms