RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PLEKHF1Q96S99 279 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-202ENST00000354421 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 PPLO60437 1756 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 IPO8O15397 1037 aaKnown RBP9.31□□□□□ -0.92
C11orf54-202ENST00000354421 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
C11orf54-202ENST00000354421 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
C11orf54-202ENST00000354421 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
C11orf54-202ENST00000354421 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 EYA1Q99502 592 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 KIF2CQ99661 725 aa9.31□□□□□ -0.92
C11orf54-202ENST00000354421 ADGRL3Q9HAR2 1447 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 COL3A1P02461 1466 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-202ENST00000354421 PIK3C2BO00750 1634 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 TMPOP42166 694 aaKnown RBP9.3□□□□□ -0.92
C11orf54-202ENST00000354421 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-202ENST00000354421 TERF1P54274 439 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-202ENST00000354421 ALDH1L2Q3SY69 923 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 PKDCCQ504Y2 493 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 NLGN2Q8NFZ4 835 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
C11orf54-202ENST00000354421 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
C11orf54-202ENST00000354421 PIK3R4Q99570 1358 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 RNF223E7ERA6 249 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 PRR20EP86478 221 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 PRR20CP86479 221 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 PRR20DP86480 221 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 PRR20BP86481 221 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 PRR20AP86496 221 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 SUZ12Q15022 739 aaKnown RBP9.29□□□□□ -0.92
C11orf54-202ENST00000354421 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 ANKLE1Q8NAG6 615 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
C11orf54-202ENST00000354421 C1orf167Q5SNV9 1468 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
C11orf54-202ENST00000354421 K7ELQ4 463 aaPredicted RBP9.28□□□□□ -0.92
C11orf54-202ENST00000354421 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
C11orf54-202ENST00000354421 TULP4Q9NRJ4 1543 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 NWD2Q9ULI1 1742 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 OFD1O75665 1012 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 KLHL40Q2TBA0 621 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 HS1BP3Q53T59 392 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 TRIM67Q6ZTA4 783 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 ZNF598Q86UK7 904 aaKnown RBP9.28□□□□□ -0.92
C11orf54-202ENST00000354421 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 ZMYND15Q9H091 742 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 PDCL3Q9H2J4 239 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 STK32BQ9NY57 414 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
C11orf54-202ENST00000354421 CUL9Q8IWT3 2517 aa9.27□□□□□ -0.92
C11orf54-202ENST00000354421 EVC2Q86UK5 1308 aa9.27□□□□□ -0.92
C11orf54-202ENST00000354421 GOLGA6L22H0YM25 854 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 DNAJB2P25686 324 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 ZNF445P59923 1031 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 SLC17A8Q8NDX2 589 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 AMOTL2Q9Y2J4 779 aa9.27□□□□□ -0.93
C11orf54-202ENST00000354421 PLSCR1O15162 318 aa9.26□□□□□ -0.93
C11orf54-202ENST00000354421 NASPP49321 788 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-202ENST00000354421 C16orf71Q8IYS4 520 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-202ENST00000354421 LNPKQ9C0E8 428 aa9.26□□□□□ -0.93
C11orf54-202ENST00000354421 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
C11orf54-202ENST00000354421 ANKRD26Q9UPS8 1709 aa9.26□□□□□ -0.93
C11orf54-202ENST00000354421 PPIP5K1Q6PFW1 1433 aa9.26□□□□□ -0.93
C11orf54-202ENST00000354421 THSD7AQ9UPZ6 1657 aa9.26□□□□□ -0.93
C11orf54-202ENST00000354421 WIPF1O43516 503 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 SSFA2P28290 1259 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
C11orf54-202ENST00000354421 ARHGAP45Q92619 1136 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 CFAP44Q96MT7 982 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 CDC42BPGQ6DT37 1551 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 WFS1O76024 890 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 CD2BP2O95400 341 aaKnown RBP9.25□□□□□ -0.93
C11orf54-202ENST00000354421 BAG4O95429 457 aaKnown RBP9.25□□□□□ -0.93
C11orf54-202ENST00000354421 LBX1P52954 281 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 SLC15A2Q16348 729 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 KIAA1211Q6ZU35 1233 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 ANP32BQ92688 251 aaKnown RBP9.25□□□□□ -0.93
C11orf54-202ENST00000354421 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
C11orf54-202ENST00000354421 POTECB2RU33 542 aa9.24□□□□□ -0.93
C11orf54-202ENST00000354421 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-202ENST00000354421 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
C11orf54-202ENST00000354421 NMRK2Q9NPI5 230 aa9.24□□□□□ -0.93
C11orf54-202ENST00000354421 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
C11orf54-202ENST00000354421 CDC45O75419 566 aa9.23□□□□□ -0.93
C11orf54-202ENST00000354421 CYP2E1P05181 493 aaPredicted RBP9.23□□□□□ -0.93
C11orf54-202ENST00000354421 NUCB2P80303 420 aa9.23□□□□□ -0.93
C11orf54-202ENST00000354421 IDI1Q13907 227 aa9.23□□□□□ -0.93
C11orf54-202ENST00000354421 MAP7D2Q96T17 732 aa9.23□□□□□ -0.93
C11orf54-202ENST00000354421 PLCH1Q4KWH8 1693 aa9.23□□□□□ -0.93
C11orf54-202ENST00000354421 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms