RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 RPAP2Q8IXW5 612 aaPredicted RBP25.2■■□□□ 1.62
SIGMAR1-202ENST00000353468 C4AP0C0L4 1744 aa25.2■■□□□ 1.62
SIGMAR1-202ENST00000353468 CEP85Q6P2H3 762 aa25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 UBE3BQ7Z3V4 1068 aa25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 JARID2Q92833 1246 aaPredicted RBP25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 NIP7Q9Y221 180 aaKnown RBP eCLIP25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 UBN2Q6ZU65 1347 aa25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 SCN7AQ01118 1682 aa25.19■■□□□ 1.62
SIGMAR1-202ENST00000353468 IGHDP01880 384 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 CASP7P55210 303 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 PARP10Q53GL7 1025 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 ANKRD44Q8N8A2 993 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 RWDD1Q9H446 243 aaPredicted RBP25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 HDAC1Q13547 482 aaPredicted RBP25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 SIRT2Q8IXJ6 389 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 FLAD1Q8NFF5 587 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 SUCLG2Q96I99 432 aa25.18■■□□□ 1.62
SIGMAR1-202ENST00000353468 PCCAP05165 728 aaPredicted RBP25.17■■□□□ 1.62
SIGMAR1-202ENST00000353468 ZBTB38Q8NAP3 1195 aaPredicted RBP25.17■■□□□ 1.62
SIGMAR1-202ENST00000353468 ANO8Q9HCE9 1232 aaPredicted RBP25.17■■□□□ 1.62
SIGMAR1-202ENST00000353468 SLC15A2Q16348 729 aa25.16■■□□□ 1.62
SIGMAR1-202ENST00000353468 TBC1D9BQ66K14 1250 aa25.16■■□□□ 1.62
SIGMAR1-202ENST00000353468 UPF1Q92900 1129 aaKnown RBP eCLIP25.16■■□□□ 1.623e-8■■■■□ 24.7
SIGMAR1-202ENST00000353468 STK32BQ9NY57 414 aa25.16■■□□□ 1.62
SIGMAR1-202ENST00000353468 ATP8B2P98198 1209 aa25.15■■□□□ 1.62
SIGMAR1-202ENST00000353468 RTL5Q5HYW3 569 aaPredicted RBP25.15■■□□□ 1.62
SIGMAR1-202ENST00000353468 SUSD4Q5VX71 490 aa25.15■■□□□ 1.62
SIGMAR1-202ENST00000353468 COL23A1Q86Y22 540 aaPredicted RBP25.15■■□□□ 1.62
SIGMAR1-202ENST00000353468 KAZALD1Q96I82 304 aa25.15■■□□□ 1.62
SIGMAR1-202ENST00000353468 FAM89AQ96GI7 184 aa25.14■■□□□ 1.62
SIGMAR1-202ENST00000353468 TRMT112Q9UI30 125 aaKnown RBP25.14■■□□□ 1.62
SIGMAR1-202ENST00000353468 KDM2BQ8NHM5 1336 aa25.14■■□□□ 1.61
SIGMAR1-202ENST00000353468 BICDL1Q6ZP65 573 aa25.14■■□□□ 1.61
SIGMAR1-202ENST00000353468 CENPQQ7L2Z9 268 aaPredicted RBP25.14■■□□□ 1.61
SIGMAR1-202ENST00000353468 PPP1R42Q7Z4L9 355 aa25.14■■□□□ 1.61
SIGMAR1-202ENST00000353468 TUBGCP6Q96RT7 1819 aa25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 PNPLA7Q6ZV29 1317 aa25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 GYS1P13807 737 aa25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 UTP14AQ9BVJ6 771 aaKnown RBP25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 BICC1Q9H694 974 aaKnown RBP25.13■■□□□ 1.61
SIGMAR1-202ENST00000353468 FAM177BA6PVY3 158 aa25.11■■□□□ 1.61
SIGMAR1-202ENST00000353468 MSH5O43196 834 aa25.11■■□□□ 1.61
SIGMAR1-202ENST00000353468 HMMRO75330 724 aa25.11■■□□□ 1.61
SIGMAR1-202ENST00000353468 EPHA10Q5JZY3 1008 aa25.11■■□□□ 1.61
SIGMAR1-202ENST00000353468 CDHR2Q9BYE9 1310 aa25.11■■□□□ 1.61
SIGMAR1-202ENST00000353468 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
SIGMAR1-202ENST00000353468 SYNE4Q8N205 404 aa25.1■■□□□ 1.61
SIGMAR1-202ENST00000353468 NTSR2O95665 410 aa25.1■■□□□ 1.61
SIGMAR1-202ENST00000353468 MTX1Q13505 466 aa25.1■■□□□ 1.61
SIGMAR1-202ENST00000353468 SH3TC1Q8TE82 1336 aa25.09■■□□□ 1.61
SIGMAR1-202ENST00000353468 PLA2G12BQ9BX93 195 aa25.09■■□□□ 1.61
SIGMAR1-202ENST00000353468 IRS4O14654 1257 aaPredicted RBP25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 SRGAP3O43295 1099 aa25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 FOXO4P98177 505 aa25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 NFIXQ14938 502 aa25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 RABL6Q3YEC7 729 aaPredicted RBP25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 SSH3Q8TE77 659 aa25.08■■□□□ 1.61
SIGMAR1-202ENST00000353468 POLA2Q14181 598 aa25.06■■□□□ 1.6
SIGMAR1-202ENST00000353468 NYXQ9GZU5 481 aa25.06■■□□□ 1.6
SIGMAR1-202ENST00000353468 TM4SF1P30408 202 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 LMBR1LQ6UX01 489 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 DCTPP1Q9H773 170 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 PDE8AO60658 829 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 QSER1Q2KHR3 1735 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 NBPF5PQ86XG9 351 aaPredicted RBP25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 NUTM1Q86Y26 1132 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 SMC5Q8IY18 1101 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 NLGN1Q8N2Q7 840 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 GCC1Q96CN9 775 aa25.05■■□□□ 1.6
SIGMAR1-202ENST00000353468 CARMIL3Q8ND23 1372 aa25.04■■□□□ 1.6
SIGMAR1-202ENST00000353468 TPTE2Q6XPS3 522 aa25.04■■□□□ 1.6
SIGMAR1-202ENST00000353468 COL24A1Q17RW2 1714 aa25.03■■□□□ 1.6
SIGMAR1-202ENST00000353468 HSP90B1P14625 803 aaKnown RBP25.03■■□□□ 1.6
SIGMAR1-202ENST00000353468 GTF2E1P29083 439 aaPredicted RBP25.03■■□□□ 1.6
SIGMAR1-202ENST00000353468 ILDR2Q71H61 639 aa25.03■■□□□ 1.6
SIGMAR1-202ENST00000353468 ERFEQ4G0M1 354 aa25.02■■□□□ 1.6
SIGMAR1-202ENST00000353468 CSF1RP07333 972 aa25.01■■□□□ 1.59
SIGMAR1-202ENST00000353468 HCLS1P14317 486 aaPredicted RBP25.01■■□□□ 1.59
SIGMAR1-202ENST00000353468 CHMP3Q9Y3E7 222 aa25.01■■□□□ 1.59
SIGMAR1-202ENST00000353468 CTSWP56202 376 aa25.01■■□□□ 1.59
SIGMAR1-202ENST00000353468 SLC10A5Q5PT55 438 aa25■■□□□ 1.59
SIGMAR1-202ENST00000353468 TTLL11Q8NHH1 800 aa25■■□□□ 1.59
SIGMAR1-202ENST00000353468 SERPINB2P05120 415 aa24.99■■□□□ 1.59
SIGMAR1-202ENST00000353468 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
SIGMAR1-202ENST00000353468 NPHP1O15259 732 aa24.98■■□□□ 1.59
SIGMAR1-202ENST00000353468 SURF6O75683 361 aaKnown RBP24.98■■□□□ 1.59
SIGMAR1-202ENST00000353468 RFX5P48382 616 aaPredicted RBP24.98■■□□□ 1.59
SIGMAR1-202ENST00000353468 DDR1Q08345 913 aa24.98■■□□□ 1.59
SIGMAR1-202ENST00000353468 EXOC6BQ9Y2D4 811 aa24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 MYH3P11055 1940 aa24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 MSL1Q68DK7 614 aa24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 CNBD1Q8NA66 436 aa24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 PA2G4Q9UQ80 394 aaKnown RBP24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 NOP58Q9Y2X3 529 aaKnown RBP24.97■■□□□ 1.59
SIGMAR1-202ENST00000353468 DDX60Q8IY21 1712 aaKnown RBP24.96■■□□□ 1.59
SIGMAR1-202ENST00000353468 ABCC12Q96J65 1359 aa24.96■■□□□ 1.59
SIGMAR1-202ENST00000353468 ANKRD45Q5TZF3 282 aa24.96■■□□□ 1.59
SIGMAR1-202ENST00000353468 CCDC85AQ96PX6 553 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms