RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SAAL1Q96ER3 474 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 KIF4AO95239 1232 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 PEX19P40855 299 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 CCDC6Q16204 474 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 TRIM4Q9C037 500 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 CEP104O60308 925 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 TADA2BQ86TJ2 420 aa5.78□□□□□ -1.48
SKP1-202ENST00000353411 INSRP06213 1382 aa5.77□□□□□ -1.48
SKP1-202ENST00000353411 SYT1P21579 422 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 PCK1P35558 622 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 FAM210AQ96ND0 272 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 JPH2Q9BR39 696 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 NESP48681 1621 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 PHACTR2O75167 634 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 CHMP4BP1P59074 171 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 NUCB1Q02818 461 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 STIM1Q13586 685 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 TMED8Q6PL24 325 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 DDX46Q7L014 1031 aaKnown RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 TBC1D31Q96DN5 1066 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■■□□□ 13.8
SKP1-202ENST00000353411 CEBPZQ03701 1054 aaKnown RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 MAP7Q14244 749 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 KRT32Q14532 448 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 SPA17Q15506 151 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 MRFAP1L1Q96HT8 127 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 CTNNA3Q9UI47 895 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.77□□□□□ -1.491e-16■■□□□ 11.8
SKP1-202ENST00000353411 USO1O60763 962 aaKnown RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 NLRP5P59047 1200 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 ZNF215Q9UL58 517 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 FAM184BQ9ULE4 1060 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 RPAP2Q8IXW5 612 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 GAS2L2Q8NHY3 880 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 TMX3Q96JJ7 454 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 ALS2CR12Q96Q35 445 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 STMN4Q9H169 189 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 GDPD2Q9HCC8 539 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 CHUKO15111 745 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 CACNA2D3Q8IZS8 1091 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 GBP7Q8N8V2 638 aaPredicted RBP5.77□□□□□ -1.49
SKP1-202ENST00000353411 TAF4BQ92750 862 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 FYCO1Q9BQS8 1478 aa5.77□□□□□ -1.49
SKP1-202ENST00000353411 LRRD1A4D1F6 860 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ZEB2O60315 1214 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 SEC24BO95487 1268 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 GNAI3P08754 354 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 HSP90AB2PQ58FF8 381 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 CPLX4Q7Z7G2 160 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 MUM1L1Q5H9M0 696 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 MAATS1Q7Z4T9 603 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ZSCAN16Q9H4T2 348 aaPredicted RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 SLC24A3Q9HC58 644 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 YEATS4O95619 227 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 C17orf53Q8N3J3 647 aaPredicted RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 IRAK4Q9NWZ3 460 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 FYB1O15117 783 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ZNF75DP51815 510 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ZSWIM4Q9H7M6 989 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 SAMD15Q9P1V8 674 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 CCDC141Q6ZP82 1450 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ARAP1Q96P48 1450 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 CYP2C19P33261 490 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 LIG3P49916 1009 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 SMARCC2Q8TAQ2 1214 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 TTC14Q96N46 770 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 NBPF7P0C2Y1 421 aaPredicted RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 XBP1P17861 261 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 SPECC1Q5M775 1068 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 CCDC129Q6ZRS4 1044 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 VCX3BQ9H321 246 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 VCX3AQ9NNX9 186 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 EIF3CLB5ME19 914 aaKnown RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 SMIM24O75264 130 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 UBASH3AP57075 661 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 MXRA7P84157 204 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 NCBP1Q09161 790 aaKnown RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 NBPF20Q3BBV1 942 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ALDH1L2Q3SY69 923 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 BLOC1S2Q6QNY1 142 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 PPFIBP2Q8ND30 876 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 EIF3CQ99613 913 aaKnown RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 GNL3LQ9NVN8 582 aaKnown RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 VASPP50552 380 aaPredicted RBP5.76□□□□□ -1.49
SKP1-202ENST00000353411 MAP3K9P80192 1104 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 ZSCAN25Q6NSZ9 544 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 KIAA1524Q8TCG1 905 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 DTNBP1Q96EV8 351 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 PDLIM2Q96JY6 352 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 SPTLC3Q9NUV7 552 aa5.76□□□□□ -1.49
SKP1-202ENST00000353411 FANCAO15360 1455 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 CCAR1Q8IX12 1150 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 NPHP3Q7Z494 1330 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 PPFIA4O75335 1185 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 EPS15P42566 896 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 SART3Q15020 963 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 JAKMIP1Q96N16 626 aaKnown RBP5.75□□□□□ -1.49
SKP1-202ENST00000353411 STIM2Q9P246 746 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 ERCC6LQ2NKX8 1250 aa5.75□□□□□ -1.49
SKP1-202ENST00000353411 CACNA2D4Q7Z3S7 1137 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms