RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 CDCA7Q9BWT1 371 aaPredicted RBP27.67■■■□□ 2.02
CNTFR-201ENST00000351266 LSG1Q9H089 658 aaKnown RBP27.67■■■□□ 2.02
CNTFR-201ENST00000351266 COL16A1Q07092 1604 aaPredicted RBP27.66■■■□□ 2.02
CNTFR-201ENST00000351266 IL25Q9H293 177 aa27.66■■■□□ 2.02
CNTFR-201ENST00000351266 EXOC5O00471 708 aa27.65■■■□□ 2.02
CNTFR-201ENST00000351266 CLEC17AQ6ZS10 378 aa27.65■■■□□ 2.02
CNTFR-201ENST00000351266 LMBR1LQ6UX01 489 aa27.65■■■□□ 2.02
CNTFR-201ENST00000351266 JARID2Q92833 1246 aaPredicted RBP27.65■■■□□ 2.02
CNTFR-201ENST00000351266 ZBTB3Q9H5J0 574 aa27.65■■■□□ 2.02
CNTFR-201ENST00000351266 FOXO4P98177 505 aa27.64■■■□□ 2.02
CNTFR-201ENST00000351266 ATG3Q9NT62 314 aa27.64■■■□□ 2.02
CNTFR-201ENST00000351266 TNNI3KQ59H18 835 aa27.63■■■□□ 2.01
CNTFR-201ENST00000351266 KIF6Q6ZMV9 814 aa27.63■■■□□ 2.01
CNTFR-201ENST00000351266 FPGT-TNNI3KV9GXZ4 949 aa27.63■■■□□ 2.01
CNTFR-201ENST00000351266 TRIM28Q13263 835 aaKnown RBP27.63■■■□□ 2.01
CNTFR-201ENST00000351266 ASAP1Q9ULH1 1129 aa27.63■■■□□ 2.01
CNTFR-201ENST00000351266 BCL9O00512 1426 aa27.62■■■□□ 2.01
CNTFR-201ENST00000351266 GOLGA6L22H0YM25 854 aa27.62■■■□□ 2.01
CNTFR-201ENST00000351266 TCIRG1Q13488 830 aa27.62■■■□□ 2.01
CNTFR-201ENST00000351266 ISCA1Q9BUE6 129 aa27.62■■■□□ 2.01
CNTFR-201ENST00000351266 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.62■■■□□ 2.01
CNTFR-201ENST00000351266 TRAK2O60296 914 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 ATP5JP18859 108 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 TMX3Q96JJ7 454 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 TLR7Q9NYK1 1049 aaKnown RBP27.61■■■□□ 2.01
CNTFR-201ENST00000351266 TJP1Q07157 1748 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 LTBP4Q8N2S1 1624 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 TFCP2Q12800 502 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 SKOR2Q2VWA4 1001 aaPredicted RBP27.61■■■□□ 2.01
CNTFR-201ENST00000351266 DNAJC10Q8IXB1 793 aa27.61■■■□□ 2.01
CNTFR-201ENST00000351266 INTS4Q96HW7 963 aaKnown RBP27.61■■■□□ 2.01
CNTFR-201ENST00000351266 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
CNTFR-201ENST00000351266 ITGB4P16144 1822 aa27.6■■■□□ 2.01
CNTFR-201ENST00000351266 CUL4AQ13619 759 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 GPR108Q9NPR9 543 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 SNRKQ9NRH2 765 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 WNK3Q9BYP7 1800 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 BOLA2Q9H3K6 86 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 CHMP3Q9Y3E7 222 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 SNX14Q9Y5W7 946 aa27.59■■■□□ 2.01
CNTFR-201ENST00000351266 RFX7Q2KHR2 1363 aa27.58■■■□□ 2.01
CNTFR-201ENST00000351266 SSFA2P28290 1259 aa27.58■■■□□ 2.01
CNTFR-201ENST00000351266 FSD1Q9BTV5 496 aa27.58■■■□□ 2.01
CNTFR-201ENST00000351266 CYP2E1P05181 493 aaPredicted RBP27.57■■■□□ 2
CNTFR-201ENST00000351266 IL15P40933 162 aaPredicted RBP27.57■■■□□ 2
CNTFR-201ENST00000351266 DBNLQ9UJU6 430 aaKnown RBP27.57■■■□□ 2
CNTFR-201ENST00000351266 HSP90AB3PQ58FF7 597 aa27.56■■■□□ 2
CNTFR-201ENST00000351266 CIAO1O76071 339 aa27.55■■■□□ 2
CNTFR-201ENST00000351266 FBXO3Q9UK99 471 aa27.55■■■□□ 2
CNTFR-201ENST00000351266 TICAM2Q86XR7 235 aa27.55■■■□□ 2
CNTFR-201ENST00000351266 KCNB2Q92953 911 aa27.55■■■□□ 2
CNTFR-201ENST00000351266 CCDC171Q6TFL3 1326 aa27.55■■■□□ 2
CNTFR-201ENST00000351266 UPF3BQ9BZI7 483 aaKnown RBP27.54■■■□□ 2
CNTFR-201ENST00000351266 MAP3K15Q6ZN16 1313 aa27.54■■■□□ 2
CNTFR-201ENST00000351266 PHLPP1O60346 1717 aa27.54■■■□□ 2
CNTFR-201ENST00000351266 PCCAP05165 728 aaPredicted RBP27.53■■■□□ 2
CNTFR-201ENST00000351266 NMIQ13287 307 aaPredicted RBP27.53■■■□□ 2
CNTFR-201ENST00000351266 ZGPATQ8N5A5 531 aaKnown RBP27.53■■■□□ 2
CNTFR-201ENST00000351266 TM6SF1Q9BZW5 370 aa27.53■■■□□ 2
CNTFR-201ENST00000351266 ZNF330Q9Y3S2 320 aaPredicted RBP27.53■■■□□ 2
CNTFR-201ENST00000351266 PLA2G12BQ9BX93 195 aa27.53■■■□□ 2
CNTFR-201ENST00000351266 EYA2O00167 538 aa27.52■■■□□ 2
CNTFR-201ENST00000351266 ZKSCAN1P17029 563 aaPredicted RBP27.52■■■□□ 2
CNTFR-201ENST00000351266 GIGYF2Q6Y7W6 1299 aaKnown RBP27.52■■■□□ 2
CNTFR-201ENST00000351266 ATG9AQ7Z3C6 839 aa27.52■■■□□ 2
CNTFR-201ENST00000351266 SPATA31A1Q5TZJ5 1347 aa27.51■■■□□ 2
CNTFR-201ENST00000351266 BAG4O95429 457 aaKnown RBP27.51■■■□□ 2
CNTFR-201ENST00000351266 CYP19A1P11511 503 aaPredicted RBP27.51■■■□□ 2
CNTFR-201ENST00000351266 ZBTB38Q8NAP3 1195 aaPredicted RBP27.51■■□□□ 1.99
CNTFR-201ENST00000351266 MAP4K1Q92918 833 aa27.51■■□□□ 1.99
CNTFR-201ENST00000351266 HAUS7Q99871 368 aa27.51■■□□□ 1.99
CNTFR-201ENST00000351266 PTH1RQ03431 593 aa27.5■■□□□ 1.99
CNTFR-201ENST00000351266 L1TD1Q5T7N2 865 aaKnown RBP27.5■■□□□ 1.99
CNTFR-201ENST00000351266 RASEFQ8IZ41 740 aa27.5■■□□□ 1.99
CNTFR-201ENST00000351266 DBNDD2Q9BQY9 259 aa27.5■■□□□ 1.99
CNTFR-201ENST00000351266 NRAPQ86VF7 1730 aa27.5■■□□□ 1.99
CNTFR-201ENST00000351266 NECTIN1Q15223 517 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 CCDC57Q2TAC2 916 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 RNF20Q5VTR2 975 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 FAM227BQ96M60 508 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 TTC14Q96N46 770 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 DDB1Q16531 1140 aa27.49■■□□□ 1.99
CNTFR-201ENST00000351266 SYTL4Q96C24 671 aaPredicted RBP27.49■■□□□ 1.99
CNTFR-201ENST00000351266 MED23Q9ULK4 1368 aa27.48■■□□□ 1.99
CNTFR-201ENST00000351266 CDHR2Q9BYE9 1310 aa27.48■■□□□ 1.99
CNTFR-201ENST00000351266 KCNJ4P48050 445 aa27.48■■□□□ 1.99
CNTFR-201ENST00000351266 PRPF40BQ6NWY9 871 aaKnown RBP27.47■■□□□ 1.99
CNTFR-201ENST00000351266 RBM8AQ9Y5S9 174 aaKnown RBP27.47■■□□□ 1.99
CNTFR-201ENST00000351266 ADAMTS2O95450 1211 aa27.47■■□□□ 1.99
CNTFR-201ENST00000351266 IL6STP40189 918 aaPredicted RBP27.47■■□□□ 1.99
CNTFR-201ENST00000351266 A0A0D9SFI3 127 aa27.46■■□□□ 1.99
CNTFR-201ENST00000351266 LIMCH1Q9UPQ0 1083 aa27.46■■□□□ 1.99
CNTFR-201ENST00000351266 ERVV-1B6SEH8 477 aa27.45■■□□□ 1.99
CNTFR-201ENST00000351266 CASTP20810 708 aaKnown RBP27.45■■□□□ 1.99
CNTFR-201ENST00000351266 PSMA5P28066 241 aa27.45■■□□□ 1.99
CNTFR-201ENST00000351266 PRIM1P49642 420 aaKnown RBP27.45■■□□□ 1.99
CNTFR-201ENST00000351266 VPS53Q5VIR6 699 aa27.45■■□□□ 1.99
CNTFR-201ENST00000351266 SLC4A9Q96Q91 983 aa27.45■■□□□ 1.99
CNTFR-201ENST00000351266 ZSWIM6Q9HCJ5 1215 aa27.45■■□□□ 1.99
CNTFR-201ENST00000351266 ISY1Q9ULR0 285 aaKnown RBP27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms