RNA–Protein interactions for RNA: ENST00000351137.8

CKLF-203, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-203ENST00000351137 SOX10P56693 466 aa20.88■□□□□ 0.93
CKLF-203ENST00000351137 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
CKLF-203ENST00000351137 PANK3Q9H999 370 aa20.87■□□□□ 0.93
CKLF-203ENST00000351137 RIC1Q4ADV7 1423 aa20.87■□□□□ 0.93
CKLF-203ENST00000351137 KIF7Q2M1P5 1343 aa20.86■□□□□ 0.93
CKLF-203ENST00000351137 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
CKLF-203ENST00000351137 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
CKLF-203ENST00000351137 CDC37L1Q7L3B6 337 aa20.85■□□□□ 0.93
CKLF-203ENST00000351137 NIM1KQ8IY84 436 aa20.85■□□□□ 0.93
CKLF-203ENST00000351137 IL17REQ8NFR9 667 aa20.85■□□□□ 0.93
CKLF-203ENST00000351137 AKAP11Q9UKA4 1901 aa20.84■□□□□ 0.93
CKLF-203ENST00000351137 HMOX1P09601 288 aa20.84■□□□□ 0.93
CKLF-203ENST00000351137 GLIS2Q9BZE0 524 aaPredicted RBP20.84■□□□□ 0.93
CKLF-203ENST00000351137 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
CKLF-203ENST00000351137 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
CKLF-203ENST00000351137 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
CKLF-203ENST00000351137 CTU1Q7Z7A3 348 aaKnown RBP20.82■□□□□ 0.92
CKLF-203ENST00000351137 NBPF15Q8N660 670 aa20.82■□□□□ 0.92
CKLF-203ENST00000351137 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
CKLF-203ENST00000351137 CCDC102AQ96A19 550 aa20.82■□□□□ 0.92
CKLF-203ENST00000351137 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
CKLF-203ENST00000351137 HUNKP57058 714 aa20.81■□□□□ 0.92
CKLF-203ENST00000351137 CRAMP1Q96RY5 1269 aa20.81■□□□□ 0.92
CKLF-203ENST00000351137 ZIC5Q96T25 663 aa20.81■□□□□ 0.92
CKLF-203ENST00000351137 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
CKLF-203ENST00000351137 FAM155AB1AL88 458 aaPredicted RBP20.8■□□□□ 0.92
CKLF-203ENST00000351137 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
CKLF-203ENST00000351137 PKN2Q16513 984 aaKnown RBP20.8■□□□□ 0.92
CKLF-203ENST00000351137 REM2Q8IYK8 340 aaPredicted RBP20.8■□□□□ 0.92
CKLF-203ENST00000351137 ZNRF3Q9ULT6 936 aa20.8■□□□□ 0.92
CKLF-203ENST00000351137 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
CKLF-203ENST00000351137 RGMBQ6NW40 437 aa20.79■□□□□ 0.92
CKLF-203ENST00000351137 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
CKLF-203ENST00000351137 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
CKLF-203ENST00000351137 CXCL9Q07325 125 aa20.78■□□□□ 0.92
CKLF-203ENST00000351137 RPGRQ92834 1020 aaKnown RBP20.78■□□□□ 0.92
CKLF-203ENST00000351137 GMPSP49915 693 aaPredicted RBP20.77■□□□□ 0.92
CKLF-203ENST00000351137 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
CKLF-203ENST00000351137 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
CKLF-203ENST00000351137 RTFDC1Q9BY42 306 aaPredicted RBP20.77■□□□□ 0.92
CKLF-203ENST00000351137 RNF186Q9NXI6 227 aa20.77■□□□□ 0.92
CKLF-203ENST00000351137 ABCC12Q96J65 1359 aa20.76■□□□□ 0.91
CKLF-203ENST00000351137 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
CKLF-203ENST00000351137 DIAPH1O60610 1272 aaKnown RBP20.76■□□□□ 0.91
CKLF-203ENST00000351137 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
CKLF-203ENST00000351137 RBM17Q96I25 401 aaKnown RBP20.76■□□□□ 0.91
CKLF-203ENST00000351137 ZNF408Q9H9D4 720 aa20.76■□□□□ 0.91
CKLF-203ENST00000351137 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
CKLF-203ENST00000351137 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
CKLF-203ENST00000351137 TNIP1Q15025 636 aa20.75■□□□□ 0.91
CKLF-203ENST00000351137 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
CKLF-203ENST00000351137 HPS5Q9UPZ3 1129 aa20.75■□□□□ 0.91
CKLF-203ENST00000351137 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
CKLF-203ENST00000351137 KIF23Q02241 960 aaPredicted RBP20.74■□□□□ 0.91
CKLF-203ENST00000351137 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
CKLF-203ENST00000351137 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
CKLF-203ENST00000351137 KCNQ3O43525 872 aa20.73■□□□□ 0.91
CKLF-203ENST00000351137 TRPA1O75762 1119 aa20.73■□□□□ 0.91
CKLF-203ENST00000351137 AOC3Q16853 763 aa20.73■□□□□ 0.91
CKLF-203ENST00000351137 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
CKLF-203ENST00000351137 GBA2Q9HCG7 927 aaPredicted RBP20.73■□□□□ 0.91
CKLF-203ENST00000351137 NUP98P52948 1817 aa20.72■□□□□ 0.91
CKLF-203ENST00000351137 FAM177BA6PVY3 158 aa20.72■□□□□ 0.91
CKLF-203ENST00000351137 PIP4K2AP48426 406 aaPredicted RBP20.72■□□□□ 0.91
CKLF-203ENST00000351137 HLFQ16534 295 aa20.72■□□□□ 0.91
CKLF-203ENST00000351137 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
CKLF-203ENST00000351137 HABP4Q5JVS0 413 aaKnown RBP20.72■□□□□ 0.91
CKLF-203ENST00000351137 C2orf69Q8N8R5 385 aa20.72■□□□□ 0.91
CKLF-203ENST00000351137 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
CKLF-203ENST00000351137 TRPM4Q8TD43 1214 aa20.71■□□□□ 0.91
CKLF-203ENST00000351137 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
CKLF-203ENST00000351137 POLR2AP24928 1970 aaKnown RBP20.7■□□□□ 0.9
CKLF-203ENST00000351137 H7C1D1 291 aa20.7■□□□□ 0.9
CKLF-203ENST00000351137 SLC10A3P09131 477 aa20.7■□□□□ 0.9
CKLF-203ENST00000351137 KIAA2012Q0VF49 1180 aa20.7■□□□□ 0.9
CKLF-203ENST00000351137 DPF2Q92785 391 aa20.7■□□□□ 0.9
CKLF-203ENST00000351137 CSRNP1Q96S65 589 aa20.7■□□□□ 0.9
CKLF-203ENST00000351137 CNOT7Q9UIV1 285 aaKnown RBP20.7■□□□□ 0.9
CKLF-203ENST00000351137 ZNF157P51786 506 aaPredicted RBP20.69■□□□□ 0.9
CKLF-203ENST00000351137 NOM1Q5C9Z4 860 aaKnown RBP20.69■□□□□ 0.9
CKLF-203ENST00000351137 USP48Q86UV5 1035 aa20.69■□□□□ 0.9
CKLF-203ENST00000351137 NUTM1Q86Y26 1132 aa20.69■□□□□ 0.9
CKLF-203ENST00000351137 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
CKLF-203ENST00000351137 MKI67P46013 3256 aaKnown RBP20.66■□□□□ 0.9
CKLF-203ENST00000351137 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
CKLF-203ENST00000351137 LAMB4A4D0S4 1761 aa20.65■□□□□ 0.9
CKLF-203ENST00000351137 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
CKLF-203ENST00000351137 MAP3K15Q6ZN16 1313 aa20.65■□□□□ 0.9
CKLF-203ENST00000351137 BBOX1O75936 387 aa20.64■□□□□ 0.89
CKLF-203ENST00000351137 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
CKLF-203ENST00000351137 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
CKLF-203ENST00000351137 RAD17O75943 681 aa20.63■□□□□ 0.89
CKLF-203ENST00000351137 FBXO46Q6PJ61 603 aaPredicted RBP20.63■□□□□ 0.89
CKLF-203ENST00000351137 DPP8Q6V1X1 898 aaPredicted RBP20.63■□□□□ 0.89
CKLF-203ENST00000351137 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
CKLF-203ENST00000351137 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
CKLF-203ENST00000351137 NTSR2O95665 410 aa20.62■□□□□ 0.89
CKLF-203ENST00000351137 RPS12P25398 132 aaKnown RBP20.62■□□□□ 0.89
CKLF-203ENST00000351137 EIF4G2P78344 907 aaKnown RBP eCLIP20.62■□□□□ 0.89
CKLF-203ENST00000351137 SLC10A5Q5PT55 438 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms