RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 DNAJC25Q9H1X3 360 aa17.71■□□□□ 0.43
SBF1-201ENST00000348911 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
SBF1-201ENST00000348911 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
SBF1-201ENST00000348911 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
SBF1-201ENST00000348911 USO1O60763 962 aaKnown RBP17.71■□□□□ 0.43
SBF1-201ENST00000348911 TSG101Q99816 390 aa17.71■□□□□ 0.43
SBF1-201ENST00000348911 RNF41Q9H4P4 317 aaPredicted RBP17.7■□□□□ 0.42
SBF1-201ENST00000348911 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■□□□ 12.2
SBF1-201ENST00000348911 CCDC12Q8WUD4 166 aaPredicted RBP17.7■□□□□ 0.42
SBF1-201ENST00000348911 USP26Q9BXU7 913 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 FANCAO15360 1455 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
SBF1-201ENST00000348911 VAMP4O75379 141 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 SEC63Q9UGP8 760 aaKnown RBP17.7■□□□□ 0.42
SBF1-201ENST00000348911 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
SBF1-201ENST00000348911 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 IQCA1Q86XH1 822 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 UBASH3AP57075 661 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 ANXA1P04083 346 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 RRAGDQ9NQL2 400 aaPredicted RBP17.69■□□□□ 0.42
SBF1-201ENST00000348911 ACEP12821 1306 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 AMOTL2Q9Y2J4 779 aa17.69■□□□□ 0.42
SBF1-201ENST00000348911 SLC5A1P13866 664 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 SYKP43405 635 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 NLRP5P59047 1200 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 LUZP1Q86V48 1076 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 LRRC2Q9BYS8 371 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 CHPF2Q9P2E5 772 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 PHF8Q9UPP1 1060 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 LMAN1P49257 510 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 TYRO3Q06418 890 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 CAVIN4Q5BKX8 364 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 SMARCC1Q92922 1105 aaPredicted RBP17.68■□□□□ 0.42
SBF1-201ENST00000348911 SNRKQ9NRH2 765 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 AK2P54819 239 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 UBE3BQ7Z3V4 1068 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 CARD14Q9BXL6 1004 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 ZSWIM4Q9H7M6 989 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 ZNF76P36508 570 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
SBF1-201ENST00000348911 ZRSR2Q15696 482 aaKnown RBP17.68■□□□□ 0.42
SBF1-201ENST00000348911 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
SBF1-201ENST00000348911 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.68■□□□□ 0.42
SBF1-201ENST00000348911 RNF123Q5XPI4 1314 aa17.68■□□□□ 0.42
SBF1-201ENST00000348911 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 AOPEPQ8N6M6 819 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 MRPS27Q92552 414 aaKnown RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 ANKRD62A6NC57 917 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 ATP5J2-PTCD1G3V325 749 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 FGFR1OPO95684 399 aaKnown RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 Q6ZUG5 572 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 KCNG4Q8TDN1 519 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 DNA2P51530 1060 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 TTF1Q15361 905 aaPredicted RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
SBF1-201ENST00000348911 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
SBF1-201ENST00000348911 ZNF287Q9HBT7 754 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 CCDC194A0A1B0GVG4 234 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 ANKRD18AQ8IVF6 992 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 POGZQ7Z3K3 1410 aa17.66■□□□□ 0.42
SBF1-201ENST00000348911 PPP1R12BO60237 982 aaPredicted RBP17.66■□□□□ 0.42
SBF1-201ENST00000348911 CWC25Q9NXE8 425 aaPredicted RBP17.66■□□□□ 0.42
SBF1-201ENST00000348911 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
SBF1-201ENST00000348911 JARID2Q92833 1246 aaPredicted RBP17.65■□□□□ 0.42
SBF1-201ENST00000348911 ALS2CR12Q96Q35 445 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 MTIF2P46199 727 aaKnown RBP17.65■□□□□ 0.42
SBF1-201ENST00000348911 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
SBF1-201ENST00000348911 TDRD12Q587J7 1177 aaKnown RBP17.65■□□□□ 0.42
SBF1-201ENST00000348911 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 PTGS1P23219 599 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 FAM107BQ9H098 131 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 RBSNQ9H1K0 784 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
SBF1-201ENST00000348911 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.42
SBF1-201ENST00000348911 GIMAP7Q8NHV1 300 aa17.64■□□□□ 0.42
SBF1-201ENST00000348911 TIGD1Q96MW7 591 aa17.64■□□□□ 0.41
SBF1-201ENST00000348911 ZBTB7BO15156 539 aaPredicted RBP17.64■□□□□ 0.41
SBF1-201ENST00000348911 CHMLP26374 656 aa17.64■□□□□ 0.41
SBF1-201ENST00000348911 MCMDC2Q4G0Z9 681 aa17.64■□□□□ 0.41
SBF1-201ENST00000348911 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
SBF1-201ENST00000348911 MICALCLQ6ZW33 695 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms