RNA–Protein interactions for RNA: ENST00000348462.5

RPL35-201, Transcript of ribosomal protein L35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-201ENST00000348462 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
RPL35-201ENST00000348462 BRIP1Q9BX63 1249 aa18.63■□□□□ 0.57
RPL35-201ENST00000348462 RIC1Q4ADV7 1423 aa18.63■□□□□ 0.57
RPL35-201ENST00000348462 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
RPL35-201ENST00000348462 COL11A2P13942 1736 aaPredicted RBP18.63■□□□□ 0.57
RPL35-201ENST00000348462 ERFEQ4G0M1 354 aa18.62■□□□□ 0.57
RPL35-201ENST00000348462 TRMT112Q9UI30 125 aaKnown RBP18.62■□□□□ 0.57
RPL35-201ENST00000348462 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
RPL35-201ENST00000348462 DLEC1Q9Y238 1755 aa18.62■□□□□ 0.57
RPL35-201ENST00000348462 F6X3S4 739 aa18.61■□□□□ 0.57
RPL35-201ENST00000348462 PDE6BP35913 854 aa18.61■□□□□ 0.57
RPL35-201ENST00000348462 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
RPL35-201ENST00000348462 CCDC191Q8NCU4 936 aa18.61■□□□□ 0.57
RPL35-201ENST00000348462 CWC25Q9NXE8 425 aaPredicted RBP18.61■□□□□ 0.57
RPL35-201ENST00000348462 LAMB2P55268 1798 aa18.6■□□□□ 0.57
RPL35-201ENST00000348462 SH3TC1Q8TE82 1336 aa18.6■□□□□ 0.57
RPL35-201ENST00000348462 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
RPL35-201ENST00000348462 DPEP1P16444 411 aa18.6■□□□□ 0.57
RPL35-201ENST00000348462 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
RPL35-201ENST00000348462 BRCA1P38398 1863 aaKnown RBP18.59■□□□□ 0.57
RPL35-201ENST00000348462 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
RPL35-201ENST00000348462 NEURL1BA8MQ27 555 aa18.59■□□□□ 0.57
RPL35-201ENST00000348462 CHRNA5P30532 468 aa18.59■□□□□ 0.57
RPL35-201ENST00000348462 CWF19L2Q2TBE0 894 aaKnown RBP18.59■□□□□ 0.57
RPL35-201ENST00000348462 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
RPL35-201ENST00000348462 LINS1Q8NG48 757 aa18.59■□□□□ 0.57
RPL35-201ENST00000348462 DDX60Q8IY21 1712 aaKnown RBP18.58■□□□□ 0.57
RPL35-201ENST00000348462 H0YIN7 160 aa18.58■□□□□ 0.56
RPL35-201ENST00000348462 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
RPL35-201ENST00000348462 NOB1Q9ULX3 412 aaKnown RBP18.58■□□□□ 0.56
RPL35-201ENST00000348462 BCAR3O75815 825 aa18.57■□□□□ 0.56
RPL35-201ENST00000348462 PCCAP05165 728 aaPredicted RBP18.57■□□□□ 0.56
RPL35-201ENST00000348462 BEND3Q5T5X7 828 aa18.57■□□□□ 0.56
RPL35-201ENST00000348462 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
RPL35-201ENST00000348462 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
RPL35-201ENST00000348462 API5Q9BZZ5 524 aaKnown RBP18.57■□□□□ 0.56
RPL35-201ENST00000348462 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
RPL35-201ENST00000348462 KLRG2A4D1S0 409 aaPredicted RBP18.55■□□□□ 0.56
RPL35-201ENST00000348462 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
RPL35-201ENST00000348462 KCNA3P22001 575 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 GCKRQ14397 625 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
RPL35-201ENST00000348462 SLC10A5Q5PT55 438 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 SRCIN1Q9C0H9 1055 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
RPL35-201ENST00000348462 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
RPL35-201ENST00000348462 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
RPL35-201ENST00000348462 ALDH1L1O75891 902 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 SRGNP10124 158 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
RPL35-201ENST00000348462 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 FRAT1Q92837 279 aaPredicted RBP18.54■□□□□ 0.56
RPL35-201ENST00000348462 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.563e-46■□□□□ 9.8
RPL35-201ENST00000348462 MASTLQ96GX5 879 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 NLRP3Q96P20 1036 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 PIM2Q9P1W9 311 aa18.54■□□□□ 0.56
RPL35-201ENST00000348462 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
RPL35-201ENST00000348462 NPR1P16066 1061 aa18.53■□□□□ 0.56
RPL35-201ENST00000348462 GPR162Q16538 588 aa18.53■□□□□ 0.56
RPL35-201ENST00000348462 CRY2Q49AN0 593 aa18.53■□□□□ 0.56
RPL35-201ENST00000348462 STYK1Q6J9G0 422 aa18.53■□□□□ 0.56
RPL35-201ENST00000348462 CACNA1SQ13698 1873 aa18.52■□□□□ 0.56
RPL35-201ENST00000348462 DALRD3Q5D0E6 543 aaKnown RBP18.52■□□□□ 0.56
RPL35-201ENST00000348462 C3orf67Q6ZVT6 689 aa18.52■□□□□ 0.56
RPL35-201ENST00000348462 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
RPL35-201ENST00000348462 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
RPL35-201ENST00000348462 RPGRQ92834 1020 aaKnown RBP18.52■□□□□ 0.56
RPL35-201ENST00000348462 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
RPL35-201ENST00000348462 BCS1LQ9Y276 419 aa18.52■□□□□ 0.56
RPL35-201ENST00000348462 ARFGEF1Q9Y6D6 1849 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 H7C1W4 665 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 ZKSCAN2Q63HK3 967 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 TTLL6Q8N841 843 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
RPL35-201ENST00000348462 ABCC4O15439 1325 aa18.5■□□□□ 0.55
RPL35-201ENST00000348462 TRIM27P14373 513 aa18.5■□□□□ 0.55
RPL35-201ENST00000348462 YBX3P16989 372 aaKnown RBP eCLIP18.5■□□□□ 0.555e-39■■□□□ 12.3
RPL35-201ENST00000348462 CCT4P50991 539 aaKnown RBP18.5■□□□□ 0.55
RPL35-201ENST00000348462 MYH3P11055 1940 aa18.49■□□□□ 0.55
RPL35-201ENST00000348462 GRM8O00222 908 aa18.49■□□□□ 0.55
RPL35-201ENST00000348462 PDE8AO60658 829 aa18.49■□□□□ 0.55
RPL35-201ENST00000348462 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
RPL35-201ENST00000348462 C9orf78Q9NZ63 289 aaPredicted RBP18.49■□□□□ 0.55
RPL35-201ENST00000348462 HOXA10P31260 410 aaPredicted RBP18.48■□□□□ 0.55
RPL35-201ENST00000348462 CASP7P55210 303 aa18.48■□□□□ 0.55
RPL35-201ENST00000348462 PRPF40BQ6NWY9 871 aaKnown RBP18.48■□□□□ 0.55
RPL35-201ENST00000348462 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
RPL35-201ENST00000348462 ALDH1B1P30837 517 aa18.47■□□□□ 0.55
RPL35-201ENST00000348462 CTSWP56202 376 aa18.47■□□□□ 0.55
RPL35-201ENST00000348462 SF3B3Q15393 1217 aaKnown RBP18.47■□□□□ 0.55
RPL35-201ENST00000348462 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
RPL35-201ENST00000348462 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
RPL35-201ENST00000348462 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
RPL35-201ENST00000348462 DDX46Q7L014 1031 aaKnown RBP18.46■□□□□ 0.55
RPL35-201ENST00000348462 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
RPL35-201ENST00000348462 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
RPL35-201ENST00000348462 CRAMP1Q96RY5 1269 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms