RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 PPP1R9BQ96SB3 815 aa9.52□□□□□ -0.88
MCPH1-201ENST00000344683 SELENOSQ9BQE4 189 aa9.52□□□□□ -0.88
MCPH1-201ENST00000344683 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.88
MCPH1-201ENST00000344683 EHMT1Q9H9B1 1298 aa9.52□□□□□ -0.88
MCPH1-201ENST00000344683 TMX1Q9H3N1 280 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 RBBP5Q15291 538 aaKnown RBP9.52□□□□□ -0.89
MCPH1-201ENST00000344683 CFAP157Q5JU67 520 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 MIER3Q7Z3K6 550 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 CALML4Q96GE6 196 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 TWISTNBQ3B726 338 aaPredicted RBP9.52□□□□□ -0.89
MCPH1-201ENST00000344683 RAB3IPQ96QF0 476 aaPredicted RBP9.52□□□□□ -0.89
MCPH1-201ENST00000344683 ZEB2O60315 1214 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 MGEA5O60502 916 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 RNF10Q8N5U6 811 aaKnown RBP9.52□□□□□ -0.89
MCPH1-201ENST00000344683 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 KRT86O43790 486 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
MCPH1-201ENST00000344683 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
MCPH1-201ENST00000344683 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
MCPH1-201ENST00000344683 DRC1Q96MC2 740 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 MTRF1LQ9UGC7 380 aaKnown RBP9.51□□□□□ -0.89
MCPH1-201ENST00000344683 RASSF2P50749 326 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.895e-7■■■■■ 37.1
MCPH1-201ENST00000344683 PDE1CQ14123 709 aaPredicted RBP9.51□□□□□ -0.89
MCPH1-201ENST00000344683 FSIP1Q8NA03 581 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC63Q8NA47 563 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 ZKSCAN5Q9Y2L8 839 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 PSME1Q06323 249 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 PNISRQ8TF01 805 aaKnown RBP9.51□□□□□ -0.89
MCPH1-201ENST00000344683 BCAP29Q9UHQ4 241 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 SSRP1Q08945 709 aaKnown RBP9.51□□□□□ -0.89
MCPH1-201ENST00000344683 CROCCP2Q86T23 111 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 FYCO1Q9BQS8 1478 aa9.51□□□□□ -0.89
MCPH1-201ENST00000344683 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
MCPH1-201ENST00000344683 AACSQ86V21 672 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 SATB1Q01826 763 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 GBP5Q96PP8 586 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 HMOX1P09601 288 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 SKILP12757 684 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 SPATS2Q86XZ4 545 aaKnown RBP9.5□□□□□ -0.89
MCPH1-201ENST00000344683 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 THEGQ9P2T0 379 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 VPS52Q8N1B4 723 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 SPAG5Q96R06 1193 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 STRN4Q9NRL3 753 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 BANK1Q8NDB2 785 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 NDC80O14777 642 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 DNAJC8O75937 253 aaPredicted RBP9.5□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC62Q6P9F0 684 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 CPLX3Q8WVH0 158 aa9.5□□□□□ -0.89
MCPH1-201ENST00000344683 SYTL4Q96C24 671 aaPredicted RBP9.5□□□□□ -0.89
MCPH1-201ENST00000344683 BAG4O95429 457 aaKnown RBP9.49□□□□□ -0.89
MCPH1-201ENST00000344683 VCX3AQ9NNX9 186 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 USP37Q86T82 979 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 SEPT10Q9P0V9 454 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 DNAI1Q9UI46 699 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 NKIRAS1Q9NYS0 192 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 TAOK1Q7L7X3 1001 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 TXNDC16Q9P2K2 825 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC170Q8IYT3 715 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
MCPH1-201ENST00000344683 FKBP4Q02790 459 aaKnown RBP eCLIP9.49□□□□□ -0.89
MCPH1-201ENST00000344683 RAPGEF2Q9Y4G8 1499 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
MCPH1-201ENST00000344683 STX6O43752 255 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 SPAG1Q07617 926 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 PPFIA1Q13136 1202 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 GSTA5Q7RTV2 222 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 AFAP1L2Q8N4X5 818 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 ZSWIM4Q9H7M6 989 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 GLRX3O76003 335 aaKnown RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 SLC8A1P32418 973 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 ATP6V1AP38606 617 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 SNX16P57768 344 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 PLCB1Q9NQ66 1216 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 FAN1Q9Y2M0 1017 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 GCKP35557 465 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 GKAP1Q5VSY0 366 aaPredicted RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
MCPH1-201ENST00000344683 KRT13P13646 458 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 MX1P20591 662 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC102BQ68D86 513 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 CCDC26Q8TAB7 109 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 TNNC1P63316 161 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 RPAINQ86UA6 219 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 Q9H521 79 aa9.48□□□□□ -0.89
MCPH1-201ENST00000344683 EXOC1Q9NV70 894 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms