RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 SPOUT1Q5T280 376 aaKnown RBP14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 TSHZ3Q63HK5 1081 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 ATP2C2O75185 946 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 RAB34Q9BZG1 259 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 CALM1P0DP23 149 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 CALM2P0DP24 149 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 CALM3P0DP25 149 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 CNNM3Q8NE01 707 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 CALML4Q96GE6 196 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 TRERF1Q96PN7 1200 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 DDX17Q92841 729 aaKnown RBP14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 FERMT1Q9BQL6 677 aa14.09□□□□□ -0.15
TRIOBP-202ENST00000344404 ARHGEF11O15085 1522 aa14.08□□□□□ -0.15
TRIOBP-202ENST00000344404 FSD2A1L4K1 749 aa14.08□□□□□ -0.15
TRIOBP-202ENST00000344404 MPHOSPH6Q99547 160 aaKnown RBP14.08□□□□□ -0.15
TRIOBP-202ENST00000344404 MXRA7P84157 204 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 TMEM67Q5HYA8 995 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 IGF1RP08069 1367 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 KRT32Q14532 448 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 POLR3GO15318 223 aaPredicted RBP14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 IKBKGQ9Y6K9 419 aa14.08□□□□□ -0.16
TRIOBP-202ENST00000344404 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC63Q8NA47 563 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 NSFL1CQ9UNZ2 370 aaKnown RBP14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 GINS2Q9Y248 185 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 A0A1W2PRG0 241 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 SLC26A6Q9BXS9 759 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 SAP30BPQ9UHR5 308 aaKnown RBP14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 URI1O94763 535 aaPredicted RBP14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 BAG3O95817 575 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 CFAP58Q5T655 872 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 FAM107BQ9H098 131 aa14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
TRIOBP-202ENST00000344404 KIF5CO60282 957 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 MAP3K11Q16584 847 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 SKAP1Q86WV1 359 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 BIRC2Q13490 618 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 ODF2LQ9ULJ1 636 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 CDK13Q14004 1512 aaKnown RBP14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 GNPATO15228 680 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 HEATR3Q7Z4Q2 680 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC160A6NGH7 325 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 MAATS1Q7Z4T9 603 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 APBA3O96018 575 aa14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
TRIOBP-202ENST00000344404 FAM83GA6ND36 823 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 ACTN2P35609 894 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 CETN1Q12798 172 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 RAB3GAP1Q15042 981 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 KIF1BPQ96EK5 621 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 FNBP4Q8N3X1 1017 aaPredicted RBP14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 LRRC59Q96AG4 307 aaKnown RBP14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 BTG4Q9NY30 223 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 ARID5AQ03989 594 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 ZSWIM4Q9H7M6 989 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 UBXN4Q92575 508 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 GDPD2Q9HCC8 539 aa14.05□□□□□ -0.16
TRIOBP-202ENST00000344404 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 CFAP57Q96MR6 1250 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 TAOK3Q9H2K8 898 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC196A0A1B0GTZ2 297 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 SORBS3O60504 671 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 CCDC175P0C221 793 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 KCNA4P22459 653 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 PDE4BQ07343 736 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
TRIOBP-202ENST00000344404 STX6O43752 255 aa14.03□□□□□ -0.16
TRIOBP-202ENST00000344404 ZC3H12CQ9C0D7 883 aaKnown RBP14.03□□□□□ -0.16
TRIOBP-202ENST00000344404 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
TRIOBP-202ENST00000344404 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
TRIOBP-202ENST00000344404 IFNL2Q8IZJ0 200 aa14.03□□□□□ -0.16
TRIOBP-202ENST00000344404 IPO4Q8TEX9 1081 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms