RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FEZ2Q9UHY8 353 aaPredicted RBP15.59■□□□□ 0.09
TRIO-202ENST00000344204 MICAL1Q8TDZ2 1067 aa15.58■□□□□ 0.09
TRIO-202ENST00000344204 NAP1L3Q99457 506 aaPredicted RBP15.58■□□□□ 0.09
TRIO-202ENST00000344204 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.09
TRIO-202ENST00000344204 F13A1P00488 732 aa15.58■□□□□ 0.09
TRIO-202ENST00000344204 PSMD1Q99460 953 aa15.58■□□□□ 0.09
TRIO-202ENST00000344204 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.09
TRIO-202ENST00000344204 GSTTP1A0A1W2PQM5 241 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 LOC102724159A0A0B4J2E5 919 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 ANAPC15P60006 121 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 PWP2Q15269 919 aaKnown RBP15.58■□□□□ 0.08
TRIO-202ENST00000344204 SPATS2Q86XZ4 545 aaKnown RBP15.58■□□□□ 0.08
TRIO-202ENST00000344204 ZSCAN16Q9H4T2 348 aaPredicted RBP15.58■□□□□ 0.08
TRIO-202ENST00000344204 ANKRD30BQ9BXX2 1392 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 PRKAR2BP31323 418 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 MCTP2Q6DN12 878 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 RPAP2Q8IXW5 612 aaPredicted RBP15.58■□□□□ 0.08
TRIO-202ENST00000344204 CCDC43Q96MW1 224 aaKnown RBP15.58■□□□□ 0.08
TRIO-202ENST00000344204 TCHPQ9BT92 498 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 CEP85LQ5SZL2 805 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 AACSQ86V21 672 aa15.58■□□□□ 0.08
TRIO-202ENST00000344204 CFAP57Q96MR6 1250 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 NEUROD6Q96NK8 337 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 SNCBQ16143 134 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 SEPT14Q6ZU15 432 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 SEPT11Q9NVA2 429 aaKnown RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 PUF60Q9UHX1 559 aaKnown RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 GPR161Q8N6U8 529 aaKnown RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 INTS4Q96HW7 963 aaKnown RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 MED4Q9NPJ6 270 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 STIM2Q9P246 746 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 GOLGA6BA6NDN3 693 aa15.57■□□□□ 0.08
TRIO-202ENST00000344204 SH3BGRP55822 239 aaPredicted RBP15.57■□□□□ 0.08
TRIO-202ENST00000344204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.57■□□□□ 0.088e-7■■□□□ 14.2
TRIO-202ENST00000344204 BRD3Q15059 726 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 VCXQ9H320 206 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 ASXL1Q8IXJ9 1541 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 LIG3P49916 1009 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 CNNM3Q8NE01 707 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 CAPZA3Q96KX2 299 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 CTAGE1Q96RT6 745 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 BAZ2BQ9UIF8 2168 aaKnown RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 FGFR1OPO95684 399 aaKnown RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 VAV2P52735 878 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 DBN1Q16643 649 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 DDX46Q7L014 1031 aaKnown RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 STAMBPO95630 424 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 PEX19P40855 299 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 DNM1Q05193 864 aaKnown RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 PHAXQ9H814 394 aaKnown RBP15.56■□□□□ 0.08
TRIO-202ENST00000344204 LMBRD1Q9NUN5 540 aa15.56■□□□□ 0.08
TRIO-202ENST00000344204 CTTNBP2Q8WZ74 1663 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 IFNKQ9P0W0 207 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 ZKSCAN8Q15776 578 aaPredicted RBP15.55■□□□□ 0.08
TRIO-202ENST00000344204 PCDHB15Q9Y5E8 787 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 PPFIA1Q13136 1202 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 CCDC96Q2M329 555 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 KRT18P05783 430 aaKnown RBP15.55■□□□□ 0.08
TRIO-202ENST00000344204 CACNA2D3Q8IZS8 1091 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 WDHD1O75717 1129 aaPredicted RBP15.55■□□□□ 0.08
TRIO-202ENST00000344204 CABS1Q96KC9 395 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 GBP5Q96PP8 586 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 ODF2LQ9ULJ1 636 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 CTNNA3Q9UI47 895 aa15.55■□□□□ 0.08
TRIO-202ENST00000344204 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
TRIO-202ENST00000344204 E2F4Q16254 413 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 MXRA7P84157 204 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 SECISBP2LQ93073 1101 aaKnown RBP15.54■□□□□ 0.08
TRIO-202ENST00000344204 ZBTB9Q96C00 473 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 RIPOR2Q9Y4F9 1068 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
TRIO-202ENST00000344204 NEDD9Q14511 834 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 ISM2Q6H9L7 571 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 MINK1Q8N4C8 1332 aaPredicted RBP15.54■□□□□ 0.08
TRIO-202ENST00000344204 ANKRD18BA2A2Z9 1011 aa15.54■□□□□ 0.08
TRIO-202ENST00000344204 KARSQ15046 597 aaKnown RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 LZTFL1Q9NQ48 299 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 SYKP43405 635 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 RASAL2Q9UJF2 1139 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 ZNF215Q9UL58 517 aaPredicted RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 ZNF569Q5MCW4 686 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 ERCC3P19447 782 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 BIRC2Q13490 618 aa15.53■□□□□ 0.08
TRIO-202ENST00000344204 ZGPATQ8N5A5 531 aaKnown RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRIO-202ENST00000344204 TMPOP42166 694 aaKnown RBP15.53■□□□□ 0.08
TRIO-202ENST00000344204 EXOC6BQ9Y2D4 811 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms