RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 GOLGA8AA7E2F4 631 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 IFIT3O14879 490 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 ZNF165P49910 485 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 ODF2Q5BJF6 829 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 LRRC59Q96AG4 307 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 DDX19AQ9NUU7 478 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 EPB41L2O43491 1005 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 RBM5P52756 815 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 CCDC181Q5TID7 509 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 CEP135Q66GS9 1140 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 EIF2AK4Q9P2K8 1649 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 DNM1Q05193 864 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 XAGE3Q8WTP9 111 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 ARHGEF12Q9NZN5 1544 aa9.36□□□□□ -0.91
UBE4B-202ENST00000343090 DNMT1P26358 1616 aaKnown RBP9.36□□□□□ -0.91
UBE4B-202ENST00000343090 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 MICU3Q86XE3 530 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 CDR1P51861 262 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 PIP4K2BP78356 416 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 G2E3Q7L622 706 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 TMC6Q7Z403 805 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 V9GYY5 206 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ADAMTS12P58397 1594 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ZBTB7BO15156 539 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 CNNM3Q8NE01 707 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ZNF445P59923 1031 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 MAP3K12Q12852 859 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 CWF19L2Q2TBE0 894 aaKnown RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
UBE4B-202ENST00000343090 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
UBE4B-202ENST00000343090 ANKRD18BA2A2Z9 1011 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 DTNBO60941 627 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 CPA1P15085 419 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 KIAA1328Q86T90 577 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 ZSCAN29Q8IWY8 852 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 CENPHQ9H3R5 247 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 PHAXQ9H814 394 aaKnown RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 GABPB1Q06547 395 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 SSRP1Q08945 709 aaKnown RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 NMIQ13287 307 aaPredicted RBP9.34□□□□□ -0.91
UBE4B-202ENST00000343090 CCDC102AQ96A19 550 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 ANTXR1Q9H6X2 564 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 MSH6P52701 1360 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 ZMYM4Q5VZL5 1548 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 STX1AQ16623 288 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 BCL2L12Q9HB09 334 aa9.34□□□□□ -0.91
UBE4B-202ENST00000343090 KIF2AO00139 706 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-202ENST00000343090 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
UBE4B-202ENST00000343090 USP26Q9BXU7 913 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 CTAGE5O15320 804 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 ERLIN1O75477 346 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 AK2P54819 239 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 ANO6Q4KMQ2 910 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 HSP90AA4PQ58FG1 418 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 TRIM35Q9UPQ4 493 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 TNRQ92752 1358 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 GRM8O00222 908 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 SLC5A1P13866 664 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 ADAMTS2O95450 1211 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 SNRPA1P09661 255 aaKnown RBP9.33□□□□□ -0.92
UBE4B-202ENST00000343090 USP8P40818 1118 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 LMAN1P49257 510 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 CAVIN4Q5BKX8 364 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 CHST3Q7LGC8 479 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 ZNF397Q8NF99 534 aaPredicted RBP9.33□□□□□ -0.92
UBE4B-202ENST00000343090 EYA1Q99502 592 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 SEPT11Q9NVA2 429 aaKnown RBP9.33□□□□□ -0.92
UBE4B-202ENST00000343090 F13A1P00488 732 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 Q6ZUG5 572 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
UBE4B-202ENST00000343090 ABCC1P33527 1531 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 KLF18A0A0U1RQI7 1052 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
UBE4B-202ENST00000343090 SYCP1Q15431 976 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 LMBR1LQ6UX01 489 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 SLC26A6Q9BXS9 759 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms