RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 USO1O60763 962 aaKnown RBP18.72■□□□□ 0.59
RTL6-201ENST00000341255 SSR1P43307 286 aaKnown RBP18.72■□□□□ 0.59
RTL6-201ENST00000341255 ZMYND15Q9H091 742 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 ATP5J2-PTCD1G3V325 749 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 POTEB2H3BUK9 544 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 FGFR1OPO95684 399 aaKnown RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 CAVIN2O95810 425 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 CCDC96Q2M329 555 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 CCDC178Q5BJE1 867 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 USP16Q9Y5T5 823 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 RPGRQ92834 1020 aaKnown RBP18.71■□□□□ 0.59
RTL6-201ENST00000341255 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 USP48Q86UV5 1035 aa18.71■□□□□ 0.59
RTL6-201ENST00000341255 KIF20AO95235 890 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 EZRP15311 586 aaKnown RBP18.7■□□□□ 0.58
RTL6-201ENST00000341255 CCDC150Q8NCX0 1101 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 CETN2P41208 172 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 VPS36Q86VN1 386 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 GOLGA6L9A6NEM1 432 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 NECAB1Q8N987 351 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 ANKRD24Q8TF21 1146 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 SNRKQ9NRH2 765 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 GNG11P61952 73 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 IFFO1Q0D2I5 559 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 ZSWIM4Q9H7M6 989 aa18.7■□□□□ 0.58
RTL6-201ENST00000341255 LMAN1P49257 510 aa18.69■□□□□ 0.58
RTL6-201ENST00000341255 RNF187Q5TA31 235 aaPredicted RBP18.69■□□□□ 0.58
RTL6-201ENST00000341255 TDRD12Q587J7 1177 aaKnown RBP18.69■□□□□ 0.58
RTL6-201ENST00000341255 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
RTL6-201ENST00000341255 SNX21Q969T3 373 aa18.69■□□□□ 0.58
RTL6-201ENST00000341255 ORC3Q9UBD5 711 aaPredicted RBP18.69■□□□□ 0.58
RTL6-201ENST00000341255 LDHCP07864 332 aa18.69■□□□□ 0.58
RTL6-201ENST00000341255 CCDC171Q6TFL3 1326 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 ANO6Q4KMQ2 910 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 ANKRD13DQ6ZTN6 518 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 CUL5Q93034 780 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 BCCIPQ9P287 314 aaKnown RBP eCLIP18.68■□□□□ 0.58
RTL6-201ENST00000341255 KIF5BP33176 963 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 CCDC12Q8WUD4 166 aaPredicted RBP18.68■□□□□ 0.58
RTL6-201ENST00000341255 CCDC186Q7Z3E2 898 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 CCDC144CPQ8IYA2 1237 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 NCOA7Q8NI08 942 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
RTL6-201ENST00000341255 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
RTL6-201ENST00000341255 RAB11FIP4Q86YS3 637 aa18.67■□□□□ 0.58
RTL6-201ENST00000341255 UBA5Q9GZZ9 404 aa18.67■□□□□ 0.58
RTL6-201ENST00000341255 ZSCAN16Q9H4T2 348 aaPredicted RBP18.67■□□□□ 0.58
RTL6-201ENST00000341255 GOPCQ9HD26 462 aa18.67■□□□□ 0.58
RTL6-201ENST00000341255 TTC21AQ8NDW8 1320 aa18.67■□□□□ 0.58
RTL6-201ENST00000341255 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
RTL6-201ENST00000341255 SKILP12757 684 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 HAND2P61296 217 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 KRT222Q8N1A0 295 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 MTIF2P46199 727 aaKnown RBP18.66■□□□□ 0.58
RTL6-201ENST00000341255 PDE4BQ07343 736 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 FAM200AQ8TCP9 573 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 MEIS3Q99687 375 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 ANXA1P04083 346 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.66■□□□□ 0.58
RTL6-201ENST00000341255 TCP11L1Q9NUJ3 509 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
RTL6-201ENST00000341255 MICALCLQ6ZW33 695 aa18.66■□□□□ 0.58
RTL6-201ENST00000341255 BAG3O95817 575 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 UQCRFS1P1P0C7P4 283 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 TRIM21P19474 475 aaKnown RBP18.65■□□□□ 0.58
RTL6-201ENST00000341255 PDE1AP54750 535 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 FAM107BQ9H098 131 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 C6orf229H3BNL8 230 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 ESYT1Q9BSJ8 1104 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
RTL6-201ENST00000341255 PPP4R3AQ6IN85 833 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 GPATCH8Q9UKJ3 1502 aaKnown RBP18.65■□□□□ 0.58
RTL6-201ENST00000341255 BRF1Q92994 677 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 ALS2CR12Q96Q35 445 aa18.65■□□□□ 0.58
RTL6-201ENST00000341255 PYM1Q9BRP8 204 aaKnown RBP18.65■□□□□ 0.58
RTL6-201ENST00000341255 TSPY2A6NKD2 308 aa18.64■□□□□ 0.58
RTL6-201ENST00000341255 HLTFQ14527 1009 aaKnown RBP eCLIP18.64■□□□□ 0.57
RTL6-201ENST00000341255 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.57
RTL6-201ENST00000341255 AMPD3Q01432 767 aa18.64■□□□□ 0.57
RTL6-201ENST00000341255 GOLGA6L10A0A0M3HER8 536 aa18.63■□□□□ 0.57
RTL6-201ENST00000341255 LIG1P18858 919 aa18.63■□□□□ 0.57
RTL6-201ENST00000341255 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
RTL6-201ENST00000341255 EHMT1Q9H9B1 1298 aa18.63■□□□□ 0.57
RTL6-201ENST00000341255 UBASH3AP57075 661 aa18.63■□□□□ 0.57
RTL6-201ENST00000341255 RAB3GAP1Q15042 981 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms