RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 CLEC11AQ9Y240 323 aa21.53■■□□□ 1.04
H3F3C-201ENST00000340398 SCN4AP35499 1836 aa21.52■■□□□ 1.04
H3F3C-201ENST00000340398 HOXA10P31260 410 aaPredicted RBP21.52■■□□□ 1.04
H3F3C-201ENST00000340398 PROSER3Q2NL68 480 aa21.52■■□□□ 1.04
H3F3C-201ENST00000340398 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.04
H3F3C-201ENST00000340398 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
H3F3C-201ENST00000340398 HACL1Q9UJ83 578 aa21.52■■□□□ 1.04
H3F3C-201ENST00000340398 PASKQ96RG2 1323 aa21.52■■□□□ 1.03
H3F3C-201ENST00000340398 NTSR2O95665 410 aa21.51■■□□□ 1.03
H3F3C-201ENST00000340398 ITGBL1O95965 494 aaPredicted RBP21.51■■□□□ 1.03
H3F3C-201ENST00000340398 EPHX2P34913 555 aa21.51■■□□□ 1.03
H3F3C-201ENST00000340398 TMPOP42166 694 aaKnown RBP21.51■■□□□ 1.03
H3F3C-201ENST00000340398 PSMD1Q99460 953 aa21.51■■□□□ 1.03
H3F3C-201ENST00000340398 SNED1Q8TER0 1413 aa21.51■■□□□ 1.03
H3F3C-201ENST00000340398 RNF123Q5XPI4 1314 aa21.51■■□□□ 1.03
H3F3C-201ENST00000340398 CAPN15O75808 1086 aa21.5■■□□□ 1.03
H3F3C-201ENST00000340398 TNS4Q8IZW8 715 aa21.5■■□□□ 1.03
H3F3C-201ENST00000340398 RBM17Q96I25 401 aaKnown RBP21.5■■□□□ 1.03
H3F3C-201ENST00000340398 NEUROD2Q15784 382 aa21.49■■□□□ 1.03
H3F3C-201ENST00000340398 JDP2Q8WYK2 163 aa21.49■■□□□ 1.03
H3F3C-201ENST00000340398 CRAMP1Q96RY5 1269 aa21.49■■□□□ 1.03
H3F3C-201ENST00000340398 GJA3Q9Y6H8 435 aa21.49■■□□□ 1.03
H3F3C-201ENST00000340398 COL4A5P29400 1685 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 RALBP1Q15311 655 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 PPP1R42Q7Z4L9 355 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 CCDC146Q8IYE0 955 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 ERBB4Q15303 1308 aa21.48■■□□□ 1.03
H3F3C-201ENST00000340398 AIMP1Q12904 312 aaKnown RBP21.47■■□□□ 1.03
H3F3C-201ENST00000340398 DDX10Q13206 875 aaKnown RBP21.47■■□□□ 1.03
H3F3C-201ENST00000340398 MAP1SQ66K74 1059 aaPredicted RBP21.47■■□□□ 1.03
H3F3C-201ENST00000340398 GPC2Q8N158 579 aa21.47■■□□□ 1.03
H3F3C-201ENST00000340398 IBTKQ9P2D0 1353 aaPredicted RBP21.47■■□□□ 1.03
H3F3C-201ENST00000340398 PPEF1O14829 653 aaPredicted RBP21.46■■□□□ 1.03
H3F3C-201ENST00000340398 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 LARGE2Q8N3Y3 721 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 ZNF428Q96B54 188 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 NLRP3Q96P20 1036 aa21.46■■□□□ 1.03
H3F3C-201ENST00000340398 UTP14AQ9BVJ6 771 aaKnown RBP21.46■■□□□ 1.03
H3F3C-201ENST00000340398 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
H3F3C-201ENST00000340398 PARP10Q53GL7 1025 aa21.45■■□□□ 1.02
H3F3C-201ENST00000340398 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.02
H3F3C-201ENST00000340398 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
H3F3C-201ENST00000340398 PNMA8AQ86V59 439 aaPredicted RBP21.44■■□□□ 1.02
H3F3C-201ENST00000340398 XAGE3Q8WTP9 111 aa21.44■■□□□ 1.02
H3F3C-201ENST00000340398 BABAM1Q9NWV8 329 aa21.44■■□□□ 1.02
H3F3C-201ENST00000340398 LAS1LQ9Y4W2 734 aaKnown RBP21.44■■□□□ 1.02
H3F3C-201ENST00000340398 CNTNAP1P78357 1384 aa21.44■■□□□ 1.02
H3F3C-201ENST00000340398 RIC1Q4ADV7 1423 aa21.44■■□□□ 1.02
H3F3C-201ENST00000340398 HCLS1P14317 486 aaPredicted RBP21.43■■□□□ 1.02
H3F3C-201ENST00000340398 EPS15P42566 896 aa21.43■■□□□ 1.02
H3F3C-201ENST00000340398 VEGFBP49765 207 aa21.43■■□□□ 1.02
H3F3C-201ENST00000340398 FMR1Q06787 632 aaKnown RBP eCLIP21.42■■□□□ 1.02
H3F3C-201ENST00000340398 NLRP10Q86W26 655 aa21.42■■□□□ 1.02
H3F3C-201ENST00000340398 ADAMTSL1Q8N6G6 1762 aa21.42■■□□□ 1.02
H3F3C-201ENST00000340398 CHL1O00533 1208 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 SCNN1DP51172 638 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 LMOD3Q0VAK6 560 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 AOC3Q16853 763 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 GRIPAP1Q4V328 841 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 ATP6V0A2Q9Y487 856 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 LTBP1Q14766 1721 aa21.41■■□□□ 1.02
H3F3C-201ENST00000340398 ABCC4O15439 1325 aa21.4■■□□□ 1.02
H3F3C-201ENST00000340398 FOXN1O15353 648 aa21.4■■□□□ 1.02
H3F3C-201ENST00000340398 PPIP5K2O43314 1243 aa21.4■■□□□ 1.02
H3F3C-201ENST00000340398 LMOD1P29536 600 aaPredicted RBP21.39■■□□□ 1.01
H3F3C-201ENST00000340398 TCIRG1Q13488 830 aa21.39■■□□□ 1.01
H3F3C-201ENST00000340398 NIM1KQ8IY84 436 aa21.39■■□□□ 1.01
H3F3C-201ENST00000340398 DDX21Q9NR30 783 aaKnown RBP eCLIP21.39■■□□□ 1.01
H3F3C-201ENST00000340398 TRMT112Q9UI30 125 aaKnown RBP21.39■■□□□ 1.01
H3F3C-201ENST00000340398 MYBBP1AQ9BQG0 1328 aaKnown RBP21.38■■□□□ 1.01
H3F3C-201ENST00000340398 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
H3F3C-201ENST00000340398 TMX4Q9H1E5 349 aaPredicted RBP21.38■■□□□ 1.01
H3F3C-201ENST00000340398 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
H3F3C-201ENST00000340398 TAF1P21675 1872 aa21.37■■□□□ 1.01
H3F3C-201ENST00000340398 BBOX1O75936 387 aa21.37■■□□□ 1.01
H3F3C-201ENST00000340398 DEFB115Q30KQ5 88 aa21.37■■□□□ 1.01
H3F3C-201ENST00000340398 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
H3F3C-201ENST00000340398 ADAMTS8Q9UP79 889 aa21.37■■□□□ 1.01
H3F3C-201ENST00000340398 CXCL9Q07325 125 aa21.36■■□□□ 1.01
H3F3C-201ENST00000340398 SP8Q8IXZ3 490 aa21.36■■□□□ 1.01
H3F3C-201ENST00000340398 LAMB2P55268 1798 aa21.36■■□□□ 1.01
H3F3C-201ENST00000340398 RASSF10A6NK89 507 aa21.34■■□□□ 1.01
H3F3C-201ENST00000340398 TRAF5O00463 557 aa21.34■■□□□ 1.01
H3F3C-201ENST00000340398 WDR43Q15061 677 aaKnown RBP eCLIP21.34■■□□□ 1.01
H3F3C-201ENST00000340398 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
H3F3C-201ENST00000340398 DDX46Q7L014 1031 aaKnown RBP21.34■■□□□ 1.01
H3F3C-201ENST00000340398 MPNDQ8N594 471 aa21.34■■□□□ 1.01
H3F3C-201ENST00000340398 RTFDC1Q9BY42 306 aaPredicted RBP21.34■■□□□ 1.01
H3F3C-201ENST00000340398 ZNRF3Q9ULT6 936 aa21.34■■□□□ 1.01
H3F3C-201ENST00000340398 ABT1Q9ULW3 272 aaKnown RBP21.34■■□□□ 1.01
H3F3C-201ENST00000340398 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 SH3TC1Q8TE82 1336 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 ATP5J2-PTCD1G3V325 749 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 HDGFL1Q5TGJ6 251 aa21.33■■□□□ 1.01
H3F3C-201ENST00000340398 USP50Q70EL3 339 aaPredicted RBP21.33■■□□□ 1.01
H3F3C-201ENST00000340398 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms