RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
MBD1-203ENST00000339998 ITGB4P16144 1822 aa18.81■□□□□ 0.6
MBD1-203ENST00000339998 PKP1Q13835 747 aa18.81■□□□□ 0.6
MBD1-203ENST00000339998 FAM227BQ96M60 508 aa18.81■□□□□ 0.6
MBD1-203ENST00000339998 SGSM2O43147 1006 aa18.8■□□□□ 0.6
MBD1-203ENST00000339998 RABL6Q3YEC7 729 aaPredicted RBP18.8■□□□□ 0.6
MBD1-203ENST00000339998 DBNLQ9UJU6 430 aaKnown RBP18.8■□□□□ 0.6
MBD1-203ENST00000339998 LRRC24Q50LG9 513 aa18.8■□□□□ 0.6
MBD1-203ENST00000339998 TTC41PQ6P2S7 1318 aa18.8■□□□□ 0.6
MBD1-203ENST00000339998 PUS3Q9BZE2 481 aaKnown RBP18.8■□□□□ 0.6
MBD1-203ENST00000339998 COPRSQ9NQ92 184 aa18.8■□□□□ 0.6
MBD1-203ENST00000339998 TBC1D2BQ9UPU7 963 aa18.8■□□□□ 0.6
MBD1-203ENST00000339998 DBNDD2Q9BQY9 259 aa18.79■□□□□ 0.6
MBD1-203ENST00000339998 CPA1P15085 419 aa18.79■□□□□ 0.6
MBD1-203ENST00000339998 PTH1RQ03431 593 aa18.79■□□□□ 0.6
MBD1-203ENST00000339998 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
MBD1-203ENST00000339998 ERBB4Q15303 1308 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
MBD1-203ENST00000339998 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 TNPO1Q92973 898 aaKnown RBP18.78■□□□□ 0.6
MBD1-203ENST00000339998 PAPPAQ13219 1627 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 TIMM10P62072 90 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 DDB1Q16531 1140 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 DIAPH3Q9NSV4 1193 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 SSFA2P28290 1259 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 KCNQ4P56696 695 aa18.78■□□□□ 0.6
MBD1-203ENST00000339998 MARCH10Q8NA82 808 aaPredicted RBP18.78■□□□□ 0.6
MBD1-203ENST00000339998 BCL9O00512 1426 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 COL9A3Q14050 684 aaPredicted RBP18.77■□□□□ 0.6
MBD1-203ENST00000339998 SLFNL1Q499Z3 407 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 CHAMP1Q96JM3 812 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
MBD1-203ENST00000339998 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
MBD1-203ENST00000339998 KCNQ2O43526 872 aa18.77■□□□□ 0.59
MBD1-203ENST00000339998 STARD3NLO95772 234 aa18.77■□□□□ 0.59
MBD1-203ENST00000339998 MCM4P33991 863 aa18.77■□□□□ 0.59
MBD1-203ENST00000339998 LSG1Q9H089 658 aaKnown RBP18.77■□□□□ 0.59
MBD1-203ENST00000339998 GZF1Q9H116 711 aaPredicted RBP18.77■□□□□ 0.59
MBD1-203ENST00000339998 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
MBD1-203ENST00000339998 TCIRG1Q13488 830 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 NEUROD6Q96NK8 337 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 FAM177BA6PVY3 158 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 ST18O60284 1047 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 GSE1Q14687 1217 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 EP400Q96L91 3159 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
MBD1-203ENST00000339998 FOXD4L5Q5VV16 416 aaPredicted RBP18.75■□□□□ 0.59
MBD1-203ENST00000339998 ATG9AQ7Z3C6 839 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 FOXD4L4Q8WXT5 416 aaPredicted RBP18.75■□□□□ 0.59
MBD1-203ENST00000339998 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
MBD1-203ENST00000339998 NMIQ13287 307 aaPredicted RBP18.75■□□□□ 0.59
MBD1-203ENST00000339998 ISCA1Q9BUE6 129 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 NUP188Q5SRE5 1749 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 UBAP1LF5GYI3 381 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 SMIM5Q71RC9 77 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
MBD1-203ENST00000339998 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
MBD1-203ENST00000339998 FAM98CQ17RN3 349 aaKnown RBP18.74■□□□□ 0.59
MBD1-203ENST00000339998 KIF6Q6ZMV9 814 aa18.74■□□□□ 0.59
MBD1-203ENST00000339998 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
MBD1-203ENST00000339998 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
MBD1-203ENST00000339998 HSPA4P34932 840 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 PTF1AQ7RTS3 328 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 MCCP23508 829 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 EVI5LQ96CN4 794 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 TMX3Q96JJ7 454 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 RAD50Q92878 1312 aa18.73■□□□□ 0.59
MBD1-203ENST00000339998 TJP1Q07157 1748 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
MBD1-203ENST00000339998 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 PRPF40BQ6NWY9 871 aaKnown RBP18.72■□□□□ 0.59
MBD1-203ENST00000339998 VSIG10Q8N0Z9 540 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
MBD1-203ENST00000339998 TAF6LQ9Y6J9 622 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
MBD1-203ENST00000339998 TOM1O60784 492 aa18.71■□□□□ 0.59
MBD1-203ENST00000339998 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
MBD1-203ENST00000339998 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
MBD1-203ENST00000339998 MAP3K15Q6ZN16 1313 aa18.71■□□□□ 0.59
MBD1-203ENST00000339998 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
MBD1-203ENST00000339998 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.58
MBD1-203ENST00000339998 ATP6V1AP38606 617 aa18.7■□□□□ 0.58
MBD1-203ENST00000339998 TEX13AQ9BXU3 409 aaPredicted RBP18.7■□□□□ 0.58
MBD1-203ENST00000339998 GIGYF2Q6Y7W6 1299 aaKnown RBP18.7■□□□□ 0.58
MBD1-203ENST00000339998 CCDC129Q6ZRS4 1044 aa18.7■□□□□ 0.58
MBD1-203ENST00000339998 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 ITPK1Q13572 414 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 DZIP3Q86Y13 1208 aaKnown RBP18.69■□□□□ 0.58
MBD1-203ENST00000339998 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
MBD1-203ENST00000339998 EYA2O00167 538 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms