RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 DPY19L2Q6NUT2 758 aa22.37■■□□□ 1.17
VSTM1-201ENST00000338372 ZNF853P0CG23 659 aa22.35■■□□□ 1.17
VSTM1-201ENST00000338372 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
VSTM1-201ENST00000338372 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
VSTM1-201ENST00000338372 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
VSTM1-201ENST00000338372 GTF2E1P29083 439 aaPredicted RBP22.34■■□□□ 1.17
VSTM1-201ENST00000338372 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
VSTM1-201ENST00000338372 L3MBTL3Q96JM7 780 aaPredicted RBP22.34■■□□□ 1.17
VSTM1-201ENST00000338372 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
VSTM1-201ENST00000338372 POTEIP0CG38 1075 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 POTEJP0CG39 1038 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
VSTM1-201ENST00000338372 PARP10Q53GL7 1025 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 XAGE3Q8WTP9 111 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 CRAMP1Q96RY5 1269 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 PSMD1Q99460 953 aa22.33■■□□□ 1.17
VSTM1-201ENST00000338372 ZNF541Q9H0D2 1346 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 TAF1P21675 1872 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 FZD9O00144 591 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 JMYQ8N9B5 988 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 KLRG1Q96E93 195 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
VSTM1-201ENST00000338372 PCNTO95613 3336 aa22.31■■□□□ 1.16
VSTM1-201ENST00000338372 PPP1R42Q7Z4L9 355 aa22.31■■□□□ 1.16
VSTM1-201ENST00000338372 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
VSTM1-201ENST00000338372 HOXB7P09629 217 aa22.3■■□□□ 1.16
VSTM1-201ENST00000338372 IARSP41252 1262 aaKnown RBP22.3■■□□□ 1.16
VSTM1-201ENST00000338372 TCIRG1Q13488 830 aa22.3■■□□□ 1.16
VSTM1-201ENST00000338372 CHPF2Q9P2E5 772 aa22.3■■□□□ 1.16
VSTM1-201ENST00000338372 DDX60Q8IY21 1712 aaKnown RBP22.3■■□□□ 1.16
VSTM1-201ENST00000338372 CCDC184Q52MB2 194 aa22.29■■□□□ 1.16
VSTM1-201ENST00000338372 CC2D2BQ6DHV5 1058 aa22.29■■□□□ 1.16
VSTM1-201ENST00000338372 UTP14AQ9BVJ6 771 aaKnown RBP22.29■■□□□ 1.16
VSTM1-201ENST00000338372 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
VSTM1-201ENST00000338372 APAF1O14727 1248 aa22.28■■□□□ 1.16
VSTM1-201ENST00000338372 AIMP1Q12904 312 aaKnown RBP22.28■■□□□ 1.16
VSTM1-201ENST00000338372 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
VSTM1-201ENST00000338372 LTBP1Q14766 1721 aa22.27■■□□□ 1.16
VSTM1-201ENST00000338372 RPGRQ92834 1020 aaKnown RBP22.27■■□□□ 1.16
VSTM1-201ENST00000338372 RBM17Q96I25 401 aaKnown RBP22.27■■□□□ 1.16
VSTM1-201ENST00000338372 TAF1DQ9H5J8 278 aaPredicted RBP22.27■■□□□ 1.16
VSTM1-201ENST00000338372 RNF123Q5XPI4 1314 aa22.27■■□□□ 1.16
VSTM1-201ENST00000338372 NLRP3Q96P20 1036 aa22.26■■□□□ 1.15
VSTM1-201ENST00000338372 ISCA1Q9BUE6 129 aa22.26■■□□□ 1.15
VSTM1-201ENST00000338372 HSP90AB3PQ58FF7 597 aa22.25■■□□□ 1.15
VSTM1-201ENST00000338372 HDGFL1Q5TGJ6 251 aa22.25■■□□□ 1.15
VSTM1-201ENST00000338372 DUSP27Q5VZP5 1158 aa22.25■■□□□ 1.15
VSTM1-201ENST00000338372 CHADLQ6NUI6 762 aa22.25■■□□□ 1.15
VSTM1-201ENST00000338372 ABCC4O15439 1325 aa22.25■■□□□ 1.15
VSTM1-201ENST00000338372 COL4A1P02462 1669 aa22.24■■□□□ 1.15
VSTM1-201ENST00000338372 PLBD2Q8NHP8 589 aa22.24■■□□□ 1.15
VSTM1-201ENST00000338372 PPEF1O14829 653 aaPredicted RBP22.23■■□□□ 1.15
VSTM1-201ENST00000338372 HCLS1P14317 486 aaPredicted RBP22.23■■□□□ 1.15
VSTM1-201ENST00000338372 GRIPAP1Q4V328 841 aa22.23■■□□□ 1.15
VSTM1-201ENST00000338372 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
VSTM1-201ENST00000338372 DBF4Q9UBU7 674 aaPredicted RBP22.23■■□□□ 1.15
VSTM1-201ENST00000338372 ATP6V0A2Q9Y487 856 aa22.23■■□□□ 1.15
VSTM1-201ENST00000338372 PASKQ96RG2 1323 aa22.23■■□□□ 1.15
VSTM1-201ENST00000338372 ITGBL1O95965 494 aaPredicted RBP22.22■■□□□ 1.15
VSTM1-201ENST00000338372 IFFO2Q5TF58 517 aa22.22■■□□□ 1.15
VSTM1-201ENST00000338372 ANKRD13DQ6ZTN6 518 aa22.22■■□□□ 1.15
VSTM1-201ENST00000338372 RTFDC1Q9BY42 306 aaPredicted RBP22.22■■□□□ 1.15
VSTM1-201ENST00000338372 LRRC37AA6NMS7 1700 aa22.22■■□□□ 1.15
VSTM1-201ENST00000338372 IQCA1LA6NCM1 817 aa22.21■■□□□ 1.15
VSTM1-201ENST00000338372 GPC2Q8N158 579 aa22.21■■□□□ 1.15
VSTM1-201ENST00000338372 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.14
VSTM1-201ENST00000338372 TRIM28Q13263 835 aaKnown RBP22.2■■□□□ 1.14
VSTM1-201ENST00000338372 LDHDQ86WU2 507 aa22.2■■□□□ 1.14
VSTM1-201ENST00000338372 TRMT112Q9UI30 125 aaKnown RBP22.2■■□□□ 1.14
VSTM1-201ENST00000338372 SH3TC1Q8TE82 1336 aa22.2■■□□□ 1.14
VSTM1-201ENST00000338372 DUOX1Q9NRD9 1551 aa22.2■■□□□ 1.14
VSTM1-201ENST00000338372 SP8Q8IXZ3 490 aa22.19■■□□□ 1.14
VSTM1-201ENST00000338372 C8orf58Q8NAV2 365 aa22.19■■□□□ 1.14
VSTM1-201ENST00000338372 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
VSTM1-201ENST00000338372 BBOX1O75936 387 aa22.18■■□□□ 1.14
VSTM1-201ENST00000338372 GNAI1P63096 354 aa22.18■■□□□ 1.14
VSTM1-201ENST00000338372 ZNF428Q96B54 188 aa22.18■■□□□ 1.14
VSTM1-201ENST00000338372 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
VSTM1-201ENST00000338372 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
VSTM1-201ENST00000338372 ATP5J2-PTCD1G3V325 749 aa22.17■■□□□ 1.14
VSTM1-201ENST00000338372 EPHX2P34913 555 aa22.17■■□□□ 1.14
VSTM1-201ENST00000338372 JDP2Q8WYK2 163 aa22.17■■□□□ 1.14
VSTM1-201ENST00000338372 SCNN1DP51172 638 aa22.16■■□□□ 1.14
VSTM1-201ENST00000338372 SF3B3Q15393 1217 aaKnown RBP22.16■■□□□ 1.14
VSTM1-201ENST00000338372 FAM89AQ96GI7 184 aa22.16■■□□□ 1.14
VSTM1-201ENST00000338372 VPS33BQ9H267 617 aa22.16■■□□□ 1.14
VSTM1-201ENST00000338372 CREBZFQ9NS37 354 aa22.16■■□□□ 1.14
VSTM1-201ENST00000338372 ELL2O00472 640 aaPredicted RBP22.15■■□□□ 1.14
VSTM1-201ENST00000338372 GRAPQ13588 217 aa22.15■■□□□ 1.14
VSTM1-201ENST00000338372 LARGE2Q8N3Y3 721 aa22.15■■□□□ 1.14
VSTM1-201ENST00000338372 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
VSTM1-201ENST00000338372 GRAPLQ8TC17 118 aaPredicted RBP22.15■■□□□ 1.14
VSTM1-201ENST00000338372 AOC3Q16853 763 aa22.14■■□□□ 1.13
VSTM1-201ENST00000338372 EIF6P56537 245 aaKnown RBP22.13■■□□□ 1.13
VSTM1-201ENST00000338372 CCDC27Q2M243 656 aa22.13■■□□□ 1.13
VSTM1-201ENST00000338372 PPIP5K2O43314 1243 aa22.12■■□□□ 1.13
VSTM1-201ENST00000338372 EPS15P42566 896 aa22.12■■□□□ 1.13
VSTM1-201ENST00000338372 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms