RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 SUSD4Q5VX71 490 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 USP44Q9H0E7 712 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 QSER1Q2KHR3 1735 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 GRM8O00222 908 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 MEIS3Q99687 375 aa17.29■□□□□ 0.36
TUBA1B-202ENST00000336023 NUP98P52948 1817 aa17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 JARID2Q92833 1246 aaPredicted RBP17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 TRMT112Q9UI30 125 aaKnown RBP17.28■□□□□ 0.36
TUBA1B-202ENST00000336023 H7C1W4 665 aa17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 MMP10P09238 476 aa17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 DDR1Q08345 913 aa17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
TUBA1B-202ENST00000336023 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 ZBTB7AO95365 584 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 NTSR2O95665 410 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 PCCAP05165 728 aaPredicted RBP17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 NBPF5PQ86XG9 351 aaPredicted RBP17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 UTYO14607 1347 aa17.26■□□□□ 0.35
TUBA1B-202ENST00000336023 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 GNAI3P08754 354 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 NYXQ9GZU5 481 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 SERPINB2P05120 415 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 CASP7P55210 303 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 NUTM1Q86Y26 1132 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 PARP3Q9Y6F1 533 aa17.25■□□□□ 0.35
TUBA1B-202ENST00000336023 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
TUBA1B-202ENST00000336023 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
TUBA1B-202ENST00000336023 NPHP1O15259 732 aa17.23■□□□□ 0.35
TUBA1B-202ENST00000336023 ATF5Q9Y2D1 282 aaPredicted RBP17.23■□□□□ 0.35
TUBA1B-202ENST00000336023 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
TUBA1B-202ENST00000336023 IRS4O14654 1257 aaPredicted RBP17.22■□□□□ 0.35
TUBA1B-202ENST00000336023 GNAI2P04899 355 aa17.22■□□□□ 0.35
TUBA1B-202ENST00000336023 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
TUBA1B-202ENST00000336023 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
TUBA1B-202ENST00000336023 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
TUBA1B-202ENST00000336023 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
TUBA1B-202ENST00000336023 AAMPQ13685 434 aa17.2■□□□□ 0.34
TUBA1B-202ENST00000336023 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
TUBA1B-202ENST00000336023 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
TUBA1B-202ENST00000336023 POLD1P28340 1107 aa17.19■□□□□ 0.34
TUBA1B-202ENST00000336023 ST5P78524 1137 aa17.19■□□□□ 0.34
TUBA1B-202ENST00000336023 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
TUBA1B-202ENST00000336023 PLA2G12BQ9BX93 195 aa17.19■□□□□ 0.34
TUBA1B-202ENST00000336023 ABCC12Q96J65 1359 aa17.18■□□□□ 0.34
TUBA1B-202ENST00000336023 COL24A1Q17RW2 1714 aa17.18■□□□□ 0.34
TUBA1B-202ENST00000336023 PDE8AO60658 829 aa17.18■□□□□ 0.34
TUBA1B-202ENST00000336023 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
TUBA1B-202ENST00000336023 FOXO4P98177 505 aa17.18■□□□□ 0.34
TUBA1B-202ENST00000336023 SRCAPQ6ZRS2 3230 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 PTGER2P43116 358 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 CTSWP56202 376 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 LMBR1LQ6UX01 489 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 NLRP3Q96P20 1036 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
TUBA1B-202ENST00000336023 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
TUBA1B-202ENST00000336023 CEP85Q6P2H3 762 aa17.15■□□□□ 0.34
TUBA1B-202ENST00000336023 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
TUBA1B-202ENST00000336023 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
TUBA1B-202ENST00000336023 SPON1Q9HCB6 807 aa17.15■□□□□ 0.34
TUBA1B-202ENST00000336023 CSF1RP07333 972 aa17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 TTLL11Q8NHH1 800 aa17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 ATP8B2P98198 1209 aa17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 CCDC85AQ96PX6 553 aaPredicted RBP17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
TUBA1B-202ENST00000336023 MTX1Q13505 466 aa17.13■□□□□ 0.33
TUBA1B-202ENST00000336023 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
TUBA1B-202ENST00000336023 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
TUBA1B-202ENST00000336023 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
TUBA1B-202ENST00000336023 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
TUBA1B-202ENST00000336023 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms