RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 SNED1Q8TER0 1413 aa32.08■■■□□ 2.73
CDKN3-202ENST00000335183 RNF123Q5XPI4 1314 aa32.07■■■□□ 2.72
CDKN3-202ENST00000335183 FZD9O00144 591 aa32.07■■■□□ 2.72
CDKN3-202ENST00000335183 JDP2Q8WYK2 163 aa32.07■■■□□ 2.72
CDKN3-202ENST00000335183 EPHX2P34913 555 aa32.06■■■□□ 2.72
CDKN3-202ENST00000335183 CC2D2BQ6DHV5 1058 aa32.06■■■□□ 2.72
CDKN3-202ENST00000335183 PASKQ96RG2 1323 aa32.05■■■□□ 2.72
CDKN3-202ENST00000335183 NTSR2O95665 410 aa32.05■■■□□ 2.72
CDKN3-202ENST00000335183 HOXA10P31260 410 aaPredicted RBP32.05■■■□□ 2.72
CDKN3-202ENST00000335183 PPP1R42Q7Z4L9 355 aa32.05■■■□□ 2.72
CDKN3-202ENST00000335183 TNS4Q8IZW8 715 aa32.05■■■□□ 2.72
CDKN3-202ENST00000335183 RBM17Q96I25 401 aaKnown RBP32.05■■■□□ 2.72
CDKN3-202ENST00000335183 ADAMTSL1Q8N6G6 1762 aa32.04■■■□□ 2.72
CDKN3-202ENST00000335183 TCERG1O14776 1098 aaKnown RBP32.04■■■□□ 2.72
CDKN3-202ENST00000335183 PCNTO95613 3336 aa32.04■■■□□ 2.72
CDKN3-202ENST00000335183 ANKRD36CQ5JPF3 1778 aa32.04■■■□□ 2.72
CDKN3-202ENST00000335183 RALBP1Q15311 655 aa32.03■■■□□ 2.72
CDKN3-202ENST00000335183 GPC2Q8N158 579 aa32.03■■■□□ 2.72
CDKN3-202ENST00000335183 ANXA1P04083 346 aa32.02■■■□□ 2.72
CDKN3-202ENST00000335183 PARP10Q53GL7 1025 aa32.02■■■□□ 2.72
CDKN3-202ENST00000335183 COL4A5P29400 1685 aa32.02■■■□□ 2.72
CDKN3-202ENST00000335183 PPEF1O14829 653 aaPredicted RBP32.01■■■□□ 2.71
CDKN3-202ENST00000335183 CAPN15O75808 1086 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 EIF6P56537 245 aaKnown RBP32.01■■■□□ 2.71
CDKN3-202ENST00000335183 PDIA6Q15084 440 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 C3orf67Q6ZVT6 689 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 SLC51AQ86UW1 340 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 PNMA8AQ86V59 439 aaPredicted RBP32.01■■■□□ 2.71
CDKN3-202ENST00000335183 CRAMP1Q96RY5 1269 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 GJA3Q9Y6H8 435 aa32.01■■■□□ 2.71
CDKN3-202ENST00000335183 TMPOP42166 694 aaKnown RBP32■■■□□ 2.71
CDKN3-202ENST00000335183 LMOD3Q0VAK6 560 aa32■■■□□ 2.71
CDKN3-202ENST00000335183 PROSER3Q2NL68 480 aa32■■■□□ 2.71
CDKN3-202ENST00000335183 LRP10Q7Z4F1 713 aa32■■■□□ 2.71
CDKN3-202ENST00000335183 CNTNAP1P78357 1384 aa31.99■■■□□ 2.71
CDKN3-202ENST00000335183 ITGBL1O95965 494 aaPredicted RBP31.99■■■□□ 2.71
CDKN3-202ENST00000335183 LARGE2Q8N3Y3 721 aa31.99■■■□□ 2.71
CDKN3-202ENST00000335183 NECTIN2Q92692 538 aa31.99■■■□□ 2.71
CDKN3-202ENST00000335183 NLRP3Q96P20 1036 aa31.99■■■□□ 2.71
CDKN3-202ENST00000335183 LAMB2P55268 1798 aa31.99■■■□□ 2.71
CDKN3-202ENST00000335183 TMEM88BA6NKF7 163 aa31.98■■■□□ 2.71
CDKN3-202ENST00000335183 GRIPAP1Q4V328 841 aa31.98■■■□□ 2.71
CDKN3-202ENST00000335183 UTP14AQ9BVJ6 771 aaKnown RBP31.98■■■□□ 2.71
CDKN3-202ENST00000335183 BABAM1Q9NWV8 329 aa31.98■■■□□ 2.71
CDKN3-202ENST00000335183 AIMP1Q12904 312 aaKnown RBP31.96■■■□□ 2.71
CDKN3-202ENST00000335183 NEUROD2Q15784 382 aa31.96■■■□□ 2.71
CDKN3-202ENST00000335183 MAP1SQ66K74 1059 aaPredicted RBP31.96■■■□□ 2.71
CDKN3-202ENST00000335183 CCDC146Q8IYE0 955 aa31.96■■■□□ 2.71
CDKN3-202ENST00000335183 LTBP1Q14766 1721 aa31.95■■■□□ 2.71
CDKN3-202ENST00000335183 TMX4Q9H1E5 349 aaPredicted RBP31.95■■■□□ 2.71
CDKN3-202ENST00000335183 LMOD1P29536 600 aaPredicted RBP31.94■■■□□ 2.7
CDKN3-202ENST00000335183 CNTROBQ8N137 903 aa31.94■■■□□ 2.7
CDKN3-202ENST00000335183 COPS6Q7L5N1 327 aa31.93■■■□□ 2.7
CDKN3-202ENST00000335183 XAGE3Q8WTP9 111 aa31.93■■■□□ 2.7
CDKN3-202ENST00000335183 SLC10A5Q5PT55 438 aa31.92■■■□□ 2.7
CDKN3-202ENST00000335183 NIM1KQ8IY84 436 aa31.92■■■□□ 2.7
CDKN3-202ENST00000335183 PPIP5K2O43314 1243 aa31.91■■■□□ 2.7
CDKN3-202ENST00000335183 DDX10Q13206 875 aaKnown RBP31.91■■■□□ 2.7
CDKN3-202ENST00000335183 HSP90AB3PQ58FF7 597 aa31.91■■■□□ 2.7
CDKN3-202ENST00000335183 LAS1LQ9Y4W2 734 aaKnown RBP31.91■■■□□ 2.7
CDKN3-202ENST00000335183 ABCC4O15439 1325 aa31.91■■■□□ 2.7
CDKN3-202ENST00000335183 MYBBP1AQ9BQG0 1328 aaKnown RBP31.91■■■□□ 2.7
CDKN3-202ENST00000335183 VEGFBP49765 207 aa31.9■■■□□ 2.7
CDKN3-202ENST00000335183 ATP6V0A2Q9Y487 856 aa31.9■■■□□ 2.7
CDKN3-202ENST00000335183 AOC3Q16853 763 aa31.89■■■□□ 2.7
CDKN3-202ENST00000335183 KRT24Q2M2I5 525 aa31.89■■■□□ 2.7
CDKN3-202ENST00000335183 TAF1P21675 1872 aa31.89■■■□□ 2.69
CDKN3-202ENST00000335183 EPS15P42566 896 aa31.88■■■□□ 2.69
CDKN3-202ENST00000335183 SCNN1DP51172 638 aa31.88■■■□□ 2.69
CDKN3-202ENST00000335183 NLRP10Q86W26 655 aa31.88■■■□□ 2.69
CDKN3-202ENST00000335183 HCLS1P14317 486 aaPredicted RBP31.87■■■□□ 2.69
CDKN3-202ENST00000335183 DDX21Q9NR30 783 aaKnown RBP eCLIP31.87■■■□□ 2.69
CDKN3-202ENST00000335183 FOXN1O15353 648 aa31.86■■■□□ 2.69
CDKN3-202ENST00000335183 WDR43Q15061 677 aaKnown RBP eCLIP31.86■■■□□ 2.69
CDKN3-202ENST00000335183 TRMT112Q9UI30 125 aaKnown RBP31.86■■■□□ 2.69
CDKN3-202ENST00000335183 CHL1O00533 1208 aa31.85■■■□□ 2.69
CDKN3-202ENST00000335183 TCIRG1Q13488 830 aa31.85■■■□□ 2.69
CDKN3-202ENST00000335183 SUPT20HQ8NEM7 779 aa31.85■■■□□ 2.69
CDKN3-202ENST00000335183 RUNDC1Q96C34 613 aa31.85■■■□□ 2.69
CDKN3-202ENST00000335183 DEFB115Q30KQ5 88 aa31.84■■■□□ 2.69
CDKN3-202ENST00000335183 ZNF428Q96B54 188 aa31.84■■■□□ 2.69
CDKN3-202ENST00000335183 CHPF2Q9P2E5 772 aa31.84■■■□□ 2.69
CDKN3-202ENST00000335183 ABT1Q9ULW3 272 aaKnown RBP31.84■■■□□ 2.69
CDKN3-202ENST00000335183 TRPM7Q96QT4 1865 aa31.84■■■□□ 2.69
CDKN3-202ENST00000335183 SH3TC1Q8TE82 1336 aa31.83■■■□□ 2.69
CDKN3-202ENST00000335183 DPP8Q6V1X1 898 aaPredicted RBP31.83■■■□□ 2.69
CDKN3-202ENST00000335183 AIDAQ96BJ3 306 aa31.83■■■□□ 2.69
CDKN3-202ENST00000335183 TRIM35Q9UPQ4 493 aa31.83■■■□□ 2.69
CDKN3-202ENST00000335183 BBOX1O75936 387 aa31.82■■■□□ 2.68
CDKN3-202ENST00000335183 DDX46Q7L014 1031 aaKnown RBP31.82■■■□□ 2.68
CDKN3-202ENST00000335183 VPS33BQ9H267 617 aa31.82■■■□□ 2.68
CDKN3-202ENST00000335183 DDX60Q8IY21 1712 aaKnown RBP31.81■■■□□ 2.68
CDKN3-202ENST00000335183 RASSF10A6NK89 507 aa31.81■■■□□ 2.68
CDKN3-202ENST00000335183 HDGFL1Q5TGJ6 251 aa31.81■■■□□ 2.68
CDKN3-202ENST00000335183 USP50Q70EL3 339 aaPredicted RBP31.81■■■□□ 2.68
CDKN3-202ENST00000335183 SP8Q8IXZ3 490 aa31.81■■■□□ 2.68
CDKN3-202ENST00000335183 MPNDQ8N594 471 aa31.81■■■□□ 2.68
CDKN3-202ENST00000335183 RTFDC1Q9BY42 306 aaPredicted RBP31.8■■■□□ 2.68
CDKN3-202ENST00000335183 ZNRF3Q9ULT6 936 aa31.8■■■□□ 2.68
CDKN3-202ENST00000335183 FMR1Q06787 632 aaKnown RBP eCLIP31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms