RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 INTS4Q96HW7 963 aaKnown RBP19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 CLCN1P35523 988 aa19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 ABCC1P33527 1531 aa19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 DISP1Q96F81 1524 aa19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 CATIPQ7Z7H3 387 aa19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 DZIP1Q86YF9 867 aaKnown RBP19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZSCAN29Q8IWY8 852 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 EXOC5O00471 708 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 POLR3DP05423 398 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 SEC24BO95487 1268 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 NECAB1Q8N987 351 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZMYM4Q5VZL5 1548 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 UQCRFS1P1P0C7P4 283 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 CCDC148Q8NFR7 591 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 KIF5CO60282 957 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 URI1O94763 535 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 RAB34Q9BZG1 259 aa19.8■□□□□ 0.76
TRAPPC11-201ENST00000334690 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZPR1O75312 459 aa19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 CDC5LQ99459 802 aaKnown RBP19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 PDCL3Q9H2J4 239 aa19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 HAND2P61296 217 aa19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 GIMAP6Q6P9H5 292 aa19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 IL15P40933 162 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 RBM5P52756 815 aaKnown RBP eCLIP19.79■□□□□ 0.76
TRAPPC11-201ENST00000334690 MCMDC2Q4G0Z9 681 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 CCDC102BQ68D86 513 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 MICU3Q86XE3 530 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 C16orf45Q96MC5 204 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 CCDC194A0A1B0GVG4 234 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 USP48Q86UV5 1035 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZNF444Q8N0Y2 327 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 FAM200AQ8TCP9 573 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 F13A1P00488 732 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 RBM25P49756 843 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 KANK3Q6NY19 840 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 PRIMPOLQ96LW4 560 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 TSPYL1Q9H0U9 437 aa19.78■□□□□ 0.76
TRAPPC11-201ENST00000334690 EYA1Q99502 592 aa19.77■□□□□ 0.76
TRAPPC11-201ENST00000334690 FKBP15Q5T1M5 1219 aa19.77■□□□□ 0.76
TRAPPC11-201ENST00000334690 LMBR1LQ6UX01 489 aa19.77■□□□□ 0.76
TRAPPC11-201ENST00000334690 PYM1Q9BRP8 204 aaKnown RBP19.77■□□□□ 0.76
TRAPPC11-201ENST00000334690 SPA17Q15506 151 aa19.77■□□□□ 0.75
TRAPPC11-201ENST00000334690 MFSD6Q6ZSS7 791 aa19.77■□□□□ 0.75
TRAPPC11-201ENST00000334690 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.75
TRAPPC11-201ENST00000334690 KIF4BQ2VIQ3 1234 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 USP26Q9BXU7 913 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 CNPY2Q9Y2B0 182 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 BIN1O00499 593 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 NLRP5P59047 1200 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 KCNG4Q8TDN1 519 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 MAP3K5Q99683 1374 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 KLF18A0A0U1RQI7 1052 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 CHMLP26374 656 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 ZNF76P36508 570 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 TAF4BQ92750 862 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 TCEANC2Q96MN5 208 aa19.76■□□□□ 0.75
TRAPPC11-201ENST00000334690 GOLGA6L9A6NEM1 432 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 FGFR1OPO95684 399 aaKnown RBP19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 KIF5BP33176 963 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 KLHL34Q8N239 644 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 BLMP54132 1417 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 CHRNA2Q15822 529 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 PANK2Q9BZ23 570 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
TRAPPC11-201ENST00000334690 PPP1R12BO60237 982 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 TMC6Q7Z403 805 aa19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 TRMT1Q9NXH9 659 aaKnown RBP19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 CGNQ9P2M7 1197 aaKnown RBP19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 DYNC1I1O14576 645 aa19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 ATP2B3Q16720 1220 aa19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 TMOD2Q9NZR1 351 aa19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
TRAPPC11-201ENST00000334690 RAD50Q92878 1312 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 LDHCP07864 332 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 HS1BP3Q53T59 392 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 TMTC2Q8N394 836 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 ANKIB1Q9P2G1 1089 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 SPATA31E1Q6ZUB1 1445 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 TMEM132AQ24JP5 1023 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 SLF2Q8IX21 1173 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 CRACR2AQ9BSW2 395 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 ABCC2Q92887 1545 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 SKIDA1Q1XH10 827 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 TMEM266Q2M3C6 531 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 CCDC150Q8NCX0 1101 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 DACT1Q9NYF0 836 aa19.73■□□□□ 0.75
TRAPPC11-201ENST00000334690 KIF20AO95235 890 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms