RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ISCA1Q9BUE6 129 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 BBOX1O75936 387 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 CREBZFQ9NS37 354 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 SF3B3Q15393 1217 aaKnown RBP8.4□□□□□ -1.07
USP16-201ENST00000334352 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.07
USP16-201ENST00000334352 SP8Q8IXZ3 490 aa8.4□□□□□ -1.07
USP16-201ENST00000334352 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 GPC2Q8N158 579 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 ABCC12Q96J65 1359 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 COL4A5P29400 1685 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 ARAP2Q8WZ64 1704 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
USP16-201ENST00000334352 HYPKQ9NX55 129 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 UBN2Q6ZU65 1347 aa8.39□□□□□ -1.07
USP16-201ENST00000334352 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
USP16-201ENST00000334352 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
USP16-201ENST00000334352 PLBD2Q8NHP8 589 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 ATP6V0A2Q9Y487 856 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 IARSP41252 1262 aaKnown RBP8.38□□□□□ -1.07
USP16-201ENST00000334352 RASSF7Q02833 373 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 NPM2Q86SE8 214 aaKnown RBP8.38□□□□□ -1.07
USP16-201ENST00000334352 NMRK2Q9NPI5 230 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 NIP7Q9Y221 180 aaKnown RBP eCLIP8.38□□□□□ -1.07
USP16-201ENST00000334352 CNTNAP1P78357 1384 aa8.38□□□□□ -1.07
USP16-201ENST00000334352 HLFQ16534 295 aa8.37□□□□□ -1.07
USP16-201ENST00000334352 USP50Q70EL3 339 aaPredicted RBP8.37□□□□□ -1.07
USP16-201ENST00000334352 PRKRIP1Q9H875 184 aaPredicted RBP8.37□□□□□ -1.07
USP16-201ENST00000334352 RIPK4P57078 832 aa8.37□□□□□ -1.07
USP16-201ENST00000334352 UTP14AQ9BVJ6 771 aaKnown RBP8.37□□□□□ -1.07
USP16-201ENST00000334352 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
USP16-201ENST00000334352 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
USP16-201ENST00000334352 ECM29Q5VYK3 1845 aa8.37□□□□□ -1.07
USP16-201ENST00000334352 ZC3H15Q8WU90 426 aaKnown RBP8.37□□□□□ -1.07
USP16-201ENST00000334352 GNAI1P63096 354 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 TSPYL4Q9UJ04 414 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 COL1A1P02452 1464 aaPredicted RBP8.36□□□□□ -1.07
USP16-201ENST00000334352 PRAMEF22A3QJZ6 481 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 RASSF10A6NK89 507 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 SUSD4Q5VX71 490 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 SYNE4Q8N205 404 aa8.36□□□□□ -1.07
USP16-201ENST00000334352 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
USP16-201ENST00000334352 DBF4Q9UBU7 674 aaPredicted RBP8.36□□□□□ -1.07
USP16-201ENST00000334352 COL4A1P02462 1669 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 PLA2G12BQ9BX93 195 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 PRDM10Q9NQV6 1147 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 TAF1P21675 1872 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 ITGBL1O95965 494 aaPredicted RBP8.35□□□□□ -1.07
USP16-201ENST00000334352 HACL1Q9UJ83 578 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
USP16-201ENST00000334352 C21orf2O43822 256 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 RPS12P25398 132 aaKnown RBP8.35□□□□□ -1.07
USP16-201ENST00000334352 GRAPQ13588 217 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 ERFEQ4G0M1 354 aa8.35□□□□□ -1.07
USP16-201ENST00000334352 GRAPLQ8TC17 118 aaPredicted RBP8.35□□□□□ -1.07
USP16-201ENST00000334352 TTLL7Q6ZT98 887 aa8.34□□□□□ -1.07
USP16-201ENST00000334352 ZNF622Q969S3 477 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■□□□□ 10.9
USP16-201ENST00000334352 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
USP16-201ENST00000334352 KIAA2012Q0VF49 1180 aa8.34□□□□□ -1.07
USP16-201ENST00000334352 DCTN1Q14203 1278 aa8.34□□□□□ -1.07
USP16-201ENST00000334352 DPF2Q92785 391 aa8.34□□□□□ -1.07
USP16-201ENST00000334352 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
USP16-201ENST00000334352 WDR63Q8IWG1 891 aa8.33□□□□□ -1.08
USP16-201ENST00000334352 ABCC4O15439 1325 aa8.33□□□□□ -1.08
USP16-201ENST00000334352 SH3TC1Q8TE82 1336 aa8.33□□□□□ -1.08
USP16-201ENST00000334352 REM2Q8IYK8 340 aaPredicted RBP8.33□□□□□ -1.08
USP16-201ENST00000334352 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
USP16-201ENST00000334352 RPGRQ92834 1020 aaKnown RBP8.33□□□□□ -1.08
USP16-201ENST00000334352 PCCAP05165 728 aaPredicted RBP8.32□□□□□ -1.08
USP16-201ENST00000334352 PAPPA2Q9BXP8 1791 aa8.32□□□□□ -1.08
USP16-201ENST00000334352 ZNF541Q9H0D2 1346 aa8.32□□□□□ -1.08
USP16-201ENST00000334352 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
USP16-201ENST00000334352 WDR43Q15061 677 aaKnown RBP eCLIP8.32□□□□□ -1.08
USP16-201ENST00000334352 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
USP16-201ENST00000334352 ZNRF3Q9ULT6 936 aa8.32□□□□□ -1.08
USP16-201ENST00000334352 EIF6P56537 245 aaKnown RBP8.31□□□□□ -1.08
USP16-201ENST00000334352 FKBP1AP62942 108 aaKnown RBP8.31□□□□□ -1.08
USP16-201ENST00000334352 TNIP1Q15025 636 aa8.31□□□□□ -1.08
USP16-201ENST00000334352 ADAMTS8Q9UP79 889 aa8.31□□□□□ -1.08
USP16-201ENST00000334352 PITPNM2Q9BZ72 1349 aa8.31□□□□□ -1.08
USP16-201ENST00000334352 ADARB2Q9NS39 739 aaKnown RBP8.31□□□□□ -1.08
USP16-201ENST00000334352 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 EPHX2P34913 555 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 XAGE3Q8WTP9 111 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 MBIPQ9NS73 344 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 COPS6Q7L5N1 327 aa8.3□□□□□ -1.08
USP16-201ENST00000334352 METTL22Q9BUU2 404 aaPredicted RBP8.3□□□□□ -1.08
USP16-201ENST00000334352 ZNF280AP59817 542 aaPredicted RBP8.29□□□□□ -1.08
USP16-201ENST00000334352 CCDC30Q5VVM6 783 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 DUSP27Q5VZP5 1158 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 EYA3Q99504 573 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 GPRC5DQ9NZD1 345 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 TLL2Q9Y6L7 1015 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 CA12O43570 354 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 SCNN1DP51172 638 aa8.29□□□□□ -1.08
USP16-201ENST00000334352 JDP2Q8WYK2 163 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms