RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 SIL1Q9H173 461 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
LIMK2-202ENST00000333611 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
LIMK2-202ENST00000333611 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
LIMK2-202ENST00000333611 CASQ1P31415 396 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 ST5P78524 1137 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 NOM1Q5C9Z4 860 aaKnown RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 ICE2Q659A1 982 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 LIMCH1Q9UPQ0 1083 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 GNAT3A8MTJ3 354 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 TPM3P06753 285 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 TPM4P67936 248 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 TTC31Q49AM3 519 aaPredicted RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 PDRG1Q9NUG6 133 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 SEC31AO94979 1220 aaKnown RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 AIMP1Q12904 312 aaKnown RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
LIMK2-202ENST00000333611 C9orf78Q9NZ63 289 aaPredicted RBP13.94□□□□□ -0.18
LIMK2-202ENST00000333611 ATP7BP35670 1465 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 GOLGA6L19H0YKK7 550 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
LIMK2-202ENST00000333611 ANAPC15P60006 121 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 RUFY3Q7L099 469 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 AP5Z1O43299 807 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 F13A1P00488 732 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 IFIT2P09913 472 aaKnown RBP13.93□□□□□ -0.18
LIMK2-202ENST00000333611 PAXBP1Q9Y5B6 917 aa13.93□□□□□ -0.18
LIMK2-202ENST00000333611 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
LIMK2-202ENST00000333611 HSPA4P34932 840 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 EFCC1Q9HA90 598 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
LIMK2-202ENST00000333611 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 UBE2HP62256 183 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
LIMK2-202ENST00000333611 LARP1BQ659C4 914 aaKnown RBP13.92□□□□□ -0.18
LIMK2-202ENST00000333611 PLEKHA4Q9H4M7 779 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 ARGLU1Q9NWB6 273 aaPredicted RBP13.92□□□□□ -0.18
LIMK2-202ENST00000333611 ATP6V1DQ9Y5K8 247 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 TXLNBQ8N3L3 684 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 UBXN4Q92575 508 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 AATKQ6ZMQ8 1374 aa13.92□□□□□ -0.18
LIMK2-202ENST00000333611 TDO2P48775 406 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 PTH1RQ03431 593 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
LIMK2-202ENST00000333611 USP27XA6NNY8 438 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 SGSM2O43147 1006 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 CYP2C19P33261 490 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 CLASRPQ8N2M8 674 aaKnown RBP13.91□□□□□ -0.18
LIMK2-202ENST00000333611 SMARCE1Q969G3 411 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 BECN2A8MW95 431 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
LIMK2-202ENST00000333611 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
LIMK2-202ENST00000333611 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
LIMK2-202ENST00000333611 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
LIMK2-202ENST00000333611 DNAJC21Q5F1R6 531 aaKnown RBP13.9□□□□□ -0.18
LIMK2-202ENST00000333611 AACSQ86V21 672 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 CPSF1Q10570 1443 aaKnown RBP13.9□□□□□ -0.18
LIMK2-202ENST00000333611 TULP2O00295 520 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 ABTB2Q8N961 1025 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 AK7Q96M32 723 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 EPC1Q9H2F5 836 aa13.9□□□□□ -0.18
LIMK2-202ENST00000333611 KCNQ3O43525 872 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 PHACTR2O75167 634 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 SKILP12757 684 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 MNAT1P51948 309 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
LIMK2-202ENST00000333611 RAD50Q92878 1312 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
LIMK2-202ENST00000333611 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
LIMK2-202ENST00000333611 DLG5Q8TDM6 1919 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 OAS2P29728 719 aaKnown RBP13.89□□□□□ -0.19
LIMK2-202ENST00000333611 CEBPAP49715 358 aaPredicted RBP13.89□□□□□ -0.19
LIMK2-202ENST00000333611 TEFQ10587 303 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 ANO6Q4KMQ2 910 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 BOLA2Q9H3K6 86 aa13.89□□□□□ -0.19
LIMK2-202ENST00000333611 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
LIMK2-202ENST00000333611 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
LIMK2-202ENST00000333611 DDX11Q96FC9 970 aa13.88□□□□□ -0.19
LIMK2-202ENST00000333611 URI1O94763 535 aaPredicted RBP13.88□□□□□ -0.19
LIMK2-202ENST00000333611 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms