RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SUCLG2Q96I99 432 aa14.77□□□□□ -0.05
VPS33B-201ENST00000333371 DBF4Q9UBU7 674 aaPredicted RBP14.77□□□□□ -0.05
VPS33B-201ENST00000333371 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
VPS33B-201ENST00000333371 TTC41PQ6P2S7 1318 aa14.77□□□□□ -0.05
VPS33B-201ENST00000333371 RNMTO43148 476 aaKnown RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 EPB41L2O43491 1005 aaKnown RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 PHF14O94880 888 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 SASH1O94885 1247 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 NCAPD2Q15021 1401 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 HSP90AB4PQ58FF6 505 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 USP42Q9H9J4 1324 aaKnown RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 GIGYF1O75420 1035 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 ADCY5O95622 1261 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 UBE2HP62256 183 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 BICC1Q9H694 974 aaKnown RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 NLRP2Q9NX02 1062 aa14.76□□□□□ -0.05
VPS33B-201ENST00000333371 RBM8AQ9Y5S9 174 aaKnown RBP14.76□□□□□ -0.05
VPS33B-201ENST00000333371 ERBB3P21860 1342 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 KCNJ4P48050 445 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 EDC3Q96F86 508 aaKnown RBP14.75□□□□□ -0.05
VPS33B-201ENST00000333371 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 HOXB7P09629 217 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 CSB-PGBD3P0DP91 1061 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 RAPGEF4Q8WZA2 1011 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 BOLA2Q9H3K6 86 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 CYP46A1Q9Y6A2 500 aa14.75□□□□□ -0.05
VPS33B-201ENST00000333371 AP5Z1O43299 807 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 MTX1Q13505 466 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 NECTIN1Q15223 517 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 ZSWIM6Q9HCJ5 1215 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
VPS33B-201ENST00000333371 CHGBP05060 677 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 MCM5P33992 734 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 PIP4K2AP48426 406 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-201ENST00000333371 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 VPS53Q5VIR6 699 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 CABLES1Q8TDN4 633 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 CAMTA1Q9Y6Y1 1673 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 GLIPR1L2Q4G1C9 344 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 TSC1Q92574 1164 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 KIAA2012Q0VF49 1180 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 CDC37L1Q7L3B6 337 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 PDCL3Q9H2J4 239 aa14.73□□□□□ -0.05
VPS33B-201ENST00000333371 GRM8O00222 908 aa14.72□□□□□ -0.05
VPS33B-201ENST00000333371 STK3Q13188 491 aa14.72□□□□□ -0.05
VPS33B-201ENST00000333371 DNTTIP2Q5QJE6 756 aaKnown RBP14.72□□□□□ -0.05
VPS33B-201ENST00000333371 EVI5LQ96CN4 794 aa14.72□□□□□ -0.05
VPS33B-201ENST00000333371 MYL6BP14649 208 aa14.72□□□□□ -0.05
VPS33B-201ENST00000333371 FUCA2Q9BTY2 467 aa14.72□□□□□ -0.05
VPS33B-201ENST00000333371 OVOS2A0A0G2JMS6 1433 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 TNS3Q68CZ2 1445 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 SLC27A2O14975 620 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 ALDH1L1O75891 902 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 TATP17735 454 aaPredicted RBP14.71□□□□□ -0.05
VPS33B-201ENST00000333371 CAMK4Q16566 473 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 CSPP1Q1MSJ5 1256 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
VPS33B-201ENST00000333371 GPATCH3Q96I76 525 aa14.71□□□□□ -0.05
VPS33B-201ENST00000333371 TERF1P54274 439 aa14.71□□□□□ -0.06
VPS33B-201ENST00000333371 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.06
VPS33B-201ENST00000333371 EPHA10Q5JZY3 1008 aa14.71□□□□□ -0.06
VPS33B-201ENST00000333371 LARP1BQ659C4 914 aaKnown RBP14.71□□□□□ -0.06
VPS33B-201ENST00000333371 TTC6Q86TZ1 520 aa14.71□□□□□ -0.06
VPS33B-201ENST00000333371 FSD1Q9BTV5 496 aa14.71□□□□□ -0.06
VPS33B-201ENST00000333371 IGKV5-2P06315 115 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 ZKSCAN1P17029 563 aaPredicted RBP14.7□□□□□ -0.06
VPS33B-201ENST00000333371 CHRNA2Q15822 529 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 FAM177BA6PVY3 158 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 SPC24Q8NBT2 197 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 MAP4K1Q92918 833 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 ATP6V1DQ9Y5K8 247 aa14.7□□□□□ -0.06
VPS33B-201ENST00000333371 KDM4AO75164 1064 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 LIG1P18858 919 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 PDIA6Q15084 440 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 UVSSAQ2YD98 709 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 SASS6Q6UVJ0 657 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 KCNB2Q92953 911 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
VPS33B-201ENST00000333371 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 TM6SF1Q9BZW5 370 aa14.69□□□□□ -0.06
VPS33B-201ENST00000333371 CCDC9Q9Y3X0 531 aaKnown RBP14.69□□□□□ -0.06
VPS33B-201ENST00000333371 RIC3Q7Z5B4 369 aa14.68□□□□□ -0.06
VPS33B-201ENST00000333371 ZSCAN31Q96LW9 406 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-201ENST00000333371 ZMYND15Q9H091 742 aa14.68□□□□□ -0.06
VPS33B-201ENST00000333371 SH2B1Q9NRF2 756 aaPredicted RBP14.68□□□□□ -0.06
VPS33B-201ENST00000333371 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
VPS33B-201ENST00000333371 NOLC1Q14978 699 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS33B-201ENST00000333371 HEG1Q9ULI3 1381 aa14.67□□□□□ -0.06
VPS33B-201ENST00000333371 TOB2Q14106 344 aaPredicted RBP14.67□□□□□ -0.06
VPS33B-201ENST00000333371 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms